Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
RPL28P46779 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
RPL28P46779 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
RPL28P46779 RNU1-22P-201ENST00000363334 158 ntBASIC0.71□□□□□ -2.3
RPL28P46779 RNU1-124P-201ENST00000363861 145 ntBASIC0.71□□□□□ -2.3
RPL28P46779 RNU6-1187P-201ENST00000364771 110 ntBASIC0.71□□□□□ -2.3
RPL28P46779 RNU6-641P-201ENST00000384006 107 ntBASIC0.71□□□□□ -2.3
RPL28P46779 RNU6-1200P-201ENST00000384162 107 ntBASIC0.71□□□□□ -2.3
RPL28P46779 SNORA26.3-201ENST00000391119 136 ntBASIC0.71□□□□□ -2.3
RPL28P46779 AL117342.1-201ENST00000404861 406 ntBASIC0.71□□□□□ -2.3
RPL28P46779 RN7SKP61-201ENST00000410642 295 ntBASIC0.71□□□□□ -2.3
RPL28P46779 RNU6-293P-201ENST00000411259 106 ntBASIC0.71□□□□□ -2.3
RPL28P46779 AP1B1P2-201ENST00000416196 106 ntBASIC0.71□□□□□ -2.3
RPL28P46779 ELOCP4-201ENST00000420090 333 ntBASIC0.71□□□□□ -2.3
RPL28P46779 SNX2P2-201ENST00000424553 323 ntBASIC0.71□□□□□ -2.3
RPL28P46779 RPS6P15-201ENST00000431996 751 ntBASIC0.71□□□□□ -2.3
RPL28P46779 AC007547.1-201ENST00000462177 490 ntBASIC0.71□□□□□ -2.3
RPL28P46779 AC010531.2-201ENST00000465012 153 ntBASIC0.71□□□□□ -2.3
RPL28P46779 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.71□□□□□ -2.3
RPL28P46779 RNU7-40P-201ENST00000516397 64 ntBASIC0.71□□□□□ -2.3
RPL28P46779 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.71□□□□□ -2.3
RPL28P46779 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.71□□□□□ -2.3
RPL28P46779 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.71□□□□□ -2.3
RPL28P46779 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.71□□□□□ -2.3
RPL28P46779 MZT1P2-201ENST00000604387 248 ntBASIC0.71□□□□□ -2.3
RPL28P46779 AC018714.1-201ENST00000605028 208 ntBASIC0.71□□□□□ -2.3
RPL28P46779 AC027335.2-201ENST00000624030 375 ntBASIC0.71□□□□□ -2.3
RPL28P46779 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
RPL28P46779 MTND4P14-201ENST00000435799 1354 ntBASIC0.7□□□□□ -2.3
RPL28P46779 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC245060.5-201ENST00000610778 3293 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
RPL28P46779 U3.4-201ENST00000363352 213 ntBASIC0.7□□□□□ -2.3
RPL28P46779 RNU6-692P-201ENST00000384496 107 ntBASIC0.7□□□□□ -2.3
RPL28P46779 HIGD1AP15-201ENST00000416198 280 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC078809.1-201ENST00000427601 140 ntBASIC0.7□□□□□ -2.3
RPL28P46779 MTCO3P29-201ENST00000432119 779 ntBASIC0.7□□□□□ -2.3
RPL28P46779 PGBD4P5-201ENST00000445958 426 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC007395.1-201ENST00000451333 677 ntBASIC0.7□□□□□ -2.3
RPL28P46779 snoU13.27-201ENST00000459278 104 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC114982.1-201ENST00000469402 321 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC087343.1-201ENST00000477341 475 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC091951.3-201ENST00000504093 246 ntBASIC0.7□□□□□ -2.3
RPL28P46779 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.7□□□□□ -2.3
RPL28P46779 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.7□□□□□ -2.3
RPL28P46779 AC074344.1-201ENST00000512823 224 ntBASIC0.7□□□□□ -2.3
RPL28P46779 RNU6-377P-201ENST00000515965 102 ntBASIC0.7□□□□□ -2.3
RPL28P46779 RNU6-1098P-201ENST00000516772 96 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.7□□□□□ -2.3
RPL28P46779 ZNF321P-202ENST00000550843 495 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC090888.2-201ENST00000559765 1144 ntBASIC0.7□□□□□ -2.3
RPL28P46779 BNIP3P8-201ENST00000597863 560 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC105129.3-201ENST00000605455 485 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AL451064.1-201ENST00000607718 471 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AL365434.2-201ENST00000607979 234 ntBASIC0.7□□□□□ -2.3
RPL28P46779 PCGEM1.1-201ENST00000613431 131 ntBASIC0.7□□□□□ -2.3
RPL28P46779 AC099654.5-201ENST00000636479 350 ntBASIC0.7□□□□□ -2.3
RPL28P46779 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
RPL28P46779 RNU1-76P-201ENST00000362903 159 ntBASIC0.69□□□□□ -2.3
RPL28P46779 RNU6-179P-201ENST00000363350 107 ntBASIC0.69□□□□□ -2.3
RPL28P46779 U3.9-201ENST00000363823 204 ntBASIC0.69□□□□□ -2.3
RPL28P46779 RNU1-96P-201ENST00000364163 162 ntBASIC0.69□□□□□ -2.3
RPL28P46779 RNU4-56P-201ENST00000364700 142 ntBASIC0.69□□□□□ -2.3
RPL28P46779 SNORD32A-201ENST00000364805 84 ntBASIC0.69□□□□□ -2.3
RPL28P46779 RNU6-336P-201ENST00000364891 107 ntBASIC0.69□□□□□ -2.3
RPL28P46779 RNU6-968P-201ENST00000384076 107 ntBASIC0.69□□□□□ -2.3
RPL28P46779 RNU6-45P-201ENST00000384471 107 ntBASIC0.69□□□□□ -2.3
RPL28P46779 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RPL28P46779 MRPL42P2-201ENST00000403169 426 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AL355143.1-201ENST00000407101 841 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL28P46779 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL28P46779 AC069257.2-201ENST00000441819 155 ntBASIC0.69□□□□□ -2.3
RPL28P46779 MTND1P18-201ENST00000448191 573 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AC013470.1-201ENST00000453438 462 ntBASIC0.69□□□□□ -2.3
RPL28P46779 RNU7-14P-201ENST00000459331 62 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AL163195.1-201ENST00000496941 348 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
RPL28P46779 AC104136.1-201ENST00000512969 394 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL28P46779 AC112206.4-201ENST00000515142 405 ntBASIC0.69□□□□□ -2.3
RPL28P46779 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.69□□□□□ -2.3
RPL28P46779 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
RPL28P46779 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.69□□□□□ -2.3
RPL28P46779 MIR3923-201ENST00000579521 83 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL28P46779 MIR4769-201ENST00000584126 77 ntBASIC0.69□□□□□ -2.3
RPL28P46779 MIR4999-201ENST00000585029 91 ntBASIC0.69□□□□□ -2.3
RPL28P46779 HMGN1P30-201ENST00000589286 268 ntBASIC0.69□□□□□ -2.3
RPL28P46779 VN1R107P-201ENST00000601784 209 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AP000811.1-201ENST00000603803 651 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AL356157.2-201ENST00000605122 111 ntBASIC0.69□□□□□ -2.3
RPL28P46779 CTHRC1P1-201ENST00000605383 469 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AC138749.5-201ENST00000611461 208 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AC116165.2-201ENST00000616705 206 ntBASIC0.69□□□□□ -2.3
RPL28P46779 AC136475.10-201ENST00000620253 385 ntBASIC0.69□□□□□ -2.3
RPL28P46779 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.69□□□□□ -2.3
RPL28P46779 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
RPL28P46779 RNU6-37P-201ENST00000362692 107 ntBASIC0.68□□□□□ -2.3
RPL28P46779 RNU5F-6P-201ENST00000362979 116 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms