Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 OSBPL9P5-201ENST00000542581 171 ntBASIC1.59□□□□□ -2.15
RORAP35398 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.59□□□□□ -2.15
RORAP35398 MTND3P12-201ENST00000559068 328 ntBASIC1.59□□□□□ -2.15
RORAP35398 MTATP6P3-201ENST00000581686 676 ntBASIC1.59□□□□□ -2.15
RORAP35398 AC010928.2-201ENST00000588017 287 ntBASIC1.59□□□□□ -2.15
RORAP35398 AC087752.4-201ENST00000605911 462 ntBASIC1.59□□□□□ -2.15
RORAP35398 AC109347.2-201ENST00000610220 349 ntBASIC1.59□□□□□ -2.15
RORAP35398 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.59□□□□□ -2.15
RORAP35398 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.59□□□□□ -2.15
RORAP35398 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
RORAP35398 AL390237.1-201ENST00000404226 1415 ntBASIC1.58□□□□□ -2.16
RORAP35398 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RORAP35398 RNU6-552P-201ENST00000362869 119 ntBASIC1.58□□□□□ -2.16
RORAP35398 RNU6-743P-201ENST00000364151 106 ntBASIC1.58□□□□□ -2.16
RORAP35398 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.58□□□□□ -2.16
RORAP35398 MIR597-201ENST00000384968 97 ntBASIC1.58□□□□□ -2.16
RORAP35398 RNU6-903P-201ENST00000391270 109 ntBASIC1.58□□□□□ -2.16
RORAP35398 RNU6-293P-201ENST00000411259 106 ntBASIC1.58□□□□□ -2.16
RORAP35398 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.58□□□□□ -2.16
RORAP35398 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.58□□□□□ -2.16
RORAP35398 MTATP6P18-201ENST00000417994 673 ntBASIC1.58□□□□□ -2.16
RORAP35398 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.58□□□□□ -2.16
RORAP35398 CETN4P-201ENST00000432407 469 ntBASIC1.58□□□□□ -2.16
RORAP35398 GMFBP1-201ENST00000467831 427 ntBASIC1.58□□□□□ -2.16
RORAP35398 AC079382.1-201ENST00000493346 557 ntBASIC1.58□□□□□ -2.16
RORAP35398 FAM206BP-201ENST00000510179 541 ntBASIC1.58□□□□□ -2.16
RORAP35398 RNU6-377P-201ENST00000515965 102 ntBASIC1.58□□□□□ -2.16
RORAP35398 Y_RNA.695-201ENST00000516715 107 ntBASIC1.58□□□□□ -2.16
RORAP35398 AP005660.1-201ENST00000522972 293 ntBASIC1.58□□□□□ -2.16
RORAP35398 AC115990.1-201ENST00000526957 301 ntBASIC1.58□□□□□ -2.16
RORAP35398 AL391646.1-201ENST00000603860 190 ntBASIC1.58□□□□□ -2.16
RORAP35398 CYP2C61P-201ENST00000604072 290 ntBASIC1.58□□□□□ -2.16
RORAP35398 AC018889.1-201ENST00000605372 397 ntBASIC1.58□□□□□ -2.16
RORAP35398 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RORAP35398 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RORAP35398 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.57□□□□□ -2.16
RORAP35398 RNU6-266P-201ENST00000364225 107 ntBASIC1.57□□□□□ -2.16
RORAP35398 SNORD32B-201ENST00000364460 84 ntBASIC1.57□□□□□ -2.16
RORAP35398 SNORD32A-201ENST00000364805 84 ntBASIC1.57□□□□□ -2.16
RORAP35398 RNU6-43P-201ENST00000384302 107 ntBASIC1.57□□□□□ -2.16
RORAP35398 RNU6-434P-201ENST00000384376 107 ntBASIC1.57□□□□□ -2.16
RORAP35398 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RORAP35398 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RORAP35398 SNORA12-201ENST00000391162 147 ntBASIC1.57□□□□□ -2.16
RORAP35398 RPS29P13-201ENST00000402041 169 ntBASIC1.57□□□□□ -2.16
RORAP35398 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.57□□□□□ -2.16
RORAP35398 HMGB1P18-201ENST00000438801 619 ntBASIC1.57□□□□□ -2.16
RORAP35398 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.57□□□□□ -2.16
RORAP35398 AL356010.1-201ENST00000456364 102 ntBASIC1.57□□□□□ -2.16
RORAP35398 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.57□□□□□ -2.16
RORAP35398 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.57□□□□□ -2.16
RORAP35398 AC093259.1-201ENST00000509755 300 ntBASIC1.57□□□□□ -2.16
RORAP35398 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.57□□□□□ -2.16
RORAP35398 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.57□□□□□ -2.16
RORAP35398 COPS8P3-201ENST00000526024 482 ntBASIC1.57□□□□□ -2.16
RORAP35398 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.57□□□□□ -2.16
RORAP35398 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.57□□□□□ -2.16
RORAP35398 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.57□□□□□ -2.16
RORAP35398 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.57□□□□□ -2.16
RORAP35398 AC022254.1-201ENST00000567857 235 ntBASIC1.57□□□□□ -2.16
RORAP35398 AL391840.1-201ENST00000571144 367 ntBASIC1.57□□□□□ -2.16
RORAP35398 AC016727.1-205ENST00000605437 569 ntBASIC1.57□□□□□ -2.16
RORAP35398 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
RORAP35398 AC072046.2-201ENST00000618366 268 ntBASIC1.57□□□□□ -2.16
RORAP35398 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RORAP35398 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.56□□□□□ -2.16
RORAP35398 RNU1-58P-201ENST00000362413 163 ntBASIC1.56□□□□□ -2.16
RORAP35398 RNU6-1120P-201ENST00000362988 108 ntBASIC1.56□□□□□ -2.16
RORAP35398 Y_RNA.399-201ENST00000383955 105 ntBASIC1.56□□□□□ -2.16
RORAP35398 Y_RNA.595-201ENST00000410403 105 ntBASIC1.56□□□□□ -2.16
RORAP35398 RNU2-29P-201ENST00000410423 189 ntBASIC1.56□□□□□ -2.16
RORAP35398 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.56□□□□□ -2.16
RORAP35398 SNAP23P1-201ENST00000433229 246 ntBASIC1.56□□□□□ -2.16
RORAP35398 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.56□□□□□ -2.16
RORAP35398 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.56□□□□□ -2.16
RORAP35398 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.56□□□□□ -2.16
RORAP35398 AC096745.1-201ENST00000509945 370 ntBASIC1.56□□□□□ -2.16
RORAP35398 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RORAP35398 SNORA31.16-201ENST00000516773 139 ntBASIC1.56□□□□□ -2.16
RORAP35398 AC109479.2-201ENST00000517842 174 ntBASIC1.56□□□□□ -2.16
RORAP35398 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.56□□□□□ -2.16
RORAP35398 MIR4498-201ENST00000577599 66 ntBASIC1.56□□□□□ -2.16
RORAP35398 AC008088.1-201ENST00000580993 280 ntBASIC1.56□□□□□ -2.16
RORAP35398 MIR4303-201ENST00000581299 66 ntBASIC1.56□□□□□ -2.16
RORAP35398 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.56□□□□□ -2.16
RORAP35398 AC103987.3-201ENST00000582071 292 ntBASIC1.56□□□□□ -2.16
RORAP35398 BNIP3P16-201ENST00000589779 534 ntBASIC1.56□□□□□ -2.16
RORAP35398 AC068790.2-201ENST00000602601 557 ntBASIC1.56□□□□□ -2.16
RORAP35398 AL034555.1-201ENST00000604816 211 ntBASIC1.56□□□□□ -2.16
RORAP35398 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
RORAP35398 AC008147.4-201ENST00000617570 1204 ntBASIC1.56□□□□□ -2.16
RORAP35398 Z69908.1-201ENST00000622603 247 ntBASIC1.56□□□□□ -2.16
RORAP35398 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.56□□□□□ -2.16
RORAP35398 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
RORAP35398 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.56□□□□□ -2.16
RORAP35398 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.56□□□□□ -2.16
RORAP35398 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RORAP35398 Y_RNA.338-201ENST00000365320 114 ntBASIC1.55□□□□□ -2.16
RORAP35398 Y_RNA.480-201ENST00000384364 102 ntBASIC1.55□□□□□ -2.16
RORAP35398 MIR30A-201ENST00000385092 71 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms