Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 U2.17-201ENST00000611454 95 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
SHMT2P34897 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
SHMT2P34897 uc_338.34-201ENST00000617467 174 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 MTND4P14-201ENST00000435799 1354 ntBASIC1.68□□□□□ -2.14
SHMT2P34897 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 SNORD32A-201ENST00000364805 84 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 MIR764-201ENST00000390811 85 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AL627390.1-201ENST00000396055 340 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AL356432.1-201ENST00000405809 419 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 Y_RNA.597-201ENST00000410463 100 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AL353689.1-201ENST00000438895 199 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AL031274.1-201ENST00000450334 232 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 PRELID3BP1-201ENST00000457142 540 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 MTCO2P18-201ENST00000457151 658 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AC108210.2-201ENST00000503681 201 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AC009646.1-201ENST00000510455 318 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.67□□□□□ -2.14
SHMT2P34897 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.67□□□□□ -2.14
SHMT2P34897 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.67□□□□□ -2.14
SHMT2P34897 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 MIR3683-201ENST00000580847 82 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 MIR3941-201ENST00000582572 103 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AC012507.3-201ENST00000603556 477 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AC245008.1-201ENST00000608123 476 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 HULC.1-201ENST00000612720 240 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AL354950.2-201ENST00000617939 290 ntBASIC1.67□□□□□ -2.14
SHMT2P34897 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.67□□□□□ -2.14
SHMT2P34897 Y_RNA.51-201ENST00000362725 102 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 RNU6-1141P-201ENST00000364520 107 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 Y_RNA.255-201ENST00000364581 97 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 RNU6-827P-201ENST00000365553 106 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHMT2P34897 MIR1283-2-201ENST00000408621 87 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 CYCSP49-201ENST00000420810 319 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 AC096920.1-201ENST00000423991 241 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 VN1R108P-201ENST00000431580 830 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.66□□□□□ -2.14
SHMT2P34897 AL606489.2-201ENST00000433886 234 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.66□□□□□ -2.14
SHMT2P34897 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.66□□□□□ -2.14
SHMT2P34897 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.66□□□□□ -2.14
SHMT2P34897 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.66□□□□□ -2.14
SHMT2P34897 AC069113.1-201ENST00000517763 267 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.66□□□□□ -2.14
SHMT2P34897 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.66□□□□□ -2.14
SHMT2P34897 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.66□□□□□ -2.14
SHMT2P34897 HSBP1P1-201ENST00000555205 166 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 AC103996.1-201ENST00000555468 102 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.66□□□□□ -2.14
SHMT2P34897 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.66□□□□□ -2.14
SHMT2P34897 MTND1P15-201ENST00000579262 949 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 AP001330.5-201ENST00000607176 411 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 AC017083.3-201ENST00000609955 700 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 AC063943.3-201ENST00000615562 356 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 AL359314.1-201ENST00000616913 261 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHMT2P34897 AP000560.1-201ENST00000624150 1937 ntBASIC1.66□□□□□ -2.14
SHMT2P34897 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHMT2P34897 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.14
SHMT2P34897 RNU4-15P-201ENST00000362613 141 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 RNU6-1159P-201ENST00000362933 107 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 RNU6-234P-201ENST00000365229 104 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 SNORD116-2-201ENST00000384274 95 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 SNORD14D-201ENST00000384390 87 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 SNORD116-6-201ENST00000384711 96 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 AL606923.1-201ENST00000406616 190 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 AL663109.1-201ENST00000411498 844 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.65□□□□□ -2.15
SHMT2P34897 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.65□□□□□ -2.15
SHMT2P34897 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.65□□□□□ -2.15
SHMT2P34897 AC010975.2-201ENST00000427781 588 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.65□□□□□ -2.15
SHMT2P34897 CBX3P6-201ENST00000430257 527 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.65□□□□□ -2.15
SHMT2P34897 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.65□□□□□ -2.15
SHMT2P34897 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.65□□□□□ -2.15
SHMT2P34897 RNU6-405P-201ENST00000516637 110 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.65□□□□□ -2.15
SHMT2P34897 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.65□□□□□ -2.15
SHMT2P34897 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.65□□□□□ -2.15
SHMT2P34897 AP003034.1-201ENST00000534621 422 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.65□□□□□ -2.15
SHMT2P34897 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.65□□□□□ -2.15
SHMT2P34897 AC015712.3-201ENST00000559380 164 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 MIR4524B-201ENST00000581569 115 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 PIGPP4-201ENST00000584447 307 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 AC087683.1-201ENST00000591187 441 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SHMT2P34897 MIR1248-201ENST00000629190 106 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 SNORD98-201ENST00000636377 67 ntBASIC1.65□□□□□ -2.15
SHMT2P34897 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SHMT2P34897 MTND5P26-201ENST00000426018 1752 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHMT2P34897 SNORD115-3-201ENST00000363100 82 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 SNORD32B-201ENST00000364460 84 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SHMT2P34897 SNORA40.19-201ENST00000390846 128 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms