Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RNU4-15P-201ENST00000362613 141 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AF228730.1-201ENST00000397972 663 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AL035398.1-201ENST00000430869 322 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AL596276.1-201ENST00000434465 418 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AC245047.7-201ENST00000440265 293 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AP000542.1-201ENST00000448473 371 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
SDC4P31431 RPS26P48-201ENST00000491713 339 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AP003355.1-201ENST00000518956 587 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AP001893.2-201ENST00000526949 202 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AL136520.1-202ENST00000555494 763 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.27□□□□□ -2.37
SDC4P31431 MIR4742-201ENST00000581069 85 ntBASIC0.27□□□□□ -2.37
SDC4P31431 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.27□□□□□ -2.37
SDC4P31431 AC104073.3-201ENST00000610942 955 ntBASIC0.27□□□□□ -2.37
SDC4P31431 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SDC4P31431 RNU6-278P-201ENST00000390945 109 ntBASIC0.26□□□□□ -2.37
SDC4P31431 MIR1305-201ENST00000408300 86 ntBASIC0.26□□□□□ -2.37
SDC4P31431 MRPS36P1-201ENST00000421291 307 ntBASIC0.26□□□□□ -2.37
SDC4P31431 AL139824.2-201ENST00000458731 1095 ntBASIC0.26□□□□□ -2.37
SDC4P31431 SUMO2P5-201ENST00000506790 245 ntBASIC0.26□□□□□ -2.37
SDC4P31431 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.26□□□□□ -2.37
SDC4P31431 Y_RNA.687-201ENST00000516558 91 ntBASIC0.26□□□□□ -2.37
SDC4P31431 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.26□□□□□ -2.37
SDC4P31431 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.26□□□□□ -2.37
SDC4P31431 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.26□□□□□ -2.37
SDC4P31431 DEFB108A-201ENST00000530110 222 ntBASIC0.26□□□□□ -2.37
SDC4P31431 APOOP3-201ENST00000536787 586 ntBASIC0.26□□□□□ -2.37
SDC4P31431 AL138889.2-201ENST00000603883 242 ntBASIC0.26□□□□□ -2.37
SDC4P31431 AC097460.3-201ENST00000623099 442 ntBASIC0.26□□□□□ -2.37
SDC4P31431 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SDC4P31431 RNU6-37P-201ENST00000362692 107 ntBASIC0.25□□□□□ -2.37
SDC4P31431 RNU6-11P-201ENST00000364234 107 ntBASIC0.25□□□□□ -2.37
SDC4P31431 RNU6-438P-201ENST00000365561 103 ntBASIC0.25□□□□□ -2.37
SDC4P31431 SMIM11P1-201ENST00000369586 178 ntBASIC0.25□□□□□ -2.37
SDC4P31431 RNU6-354P-201ENST00000383862 107 ntBASIC0.25□□□□□ -2.37
SDC4P31431 RNU6-610P-201ENST00000384264 107 ntBASIC0.25□□□□□ -2.37
SDC4P31431 SNORA80D-201ENST00000384488 135 ntBASIC0.25□□□□□ -2.37
SDC4P31431 TIMM9P2-201ENST00000419324 266 ntBASIC0.25□□□□□ -2.37
SDC4P31431 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
SDC4P31431 RNU6-1041P-201ENST00000516254 102 ntBASIC0.25□□□□□ -2.37
SDC4P31431 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
SDC4P31431 SNORA43.2-201ENST00000516652 128 ntBASIC0.25□□□□□ -2.37
SDC4P31431 RNU6-677P-201ENST00000516914 101 ntBASIC0.25□□□□□ -2.37
SDC4P31431 AC115990.1-201ENST00000526957 301 ntBASIC0.25□□□□□ -2.37
SDC4P31431 Z83818.1-201ENST00000603584 150 ntBASIC0.25□□□□□ -2.37
SDC4P31431 MIR15A-201ENST00000607334 83 ntBASIC0.25□□□□□ -2.37
SDC4P31431 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SDC4P31431 RNU6-534P-201ENST00000364877 106 ntBASIC0.24□□□□□ -2.37
SDC4P31431 SNORA32.2-201ENST00000384049 122 ntBASIC0.24□□□□□ -2.37
SDC4P31431 RNU6-207P-201ENST00000384137 107 ntBASIC0.24□□□□□ -2.37
SDC4P31431 MIR10A-201ENST00000385043 110 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AL359704.1-201ENST00000411586 781 ntBASIC0.24□□□□□ -2.37
SDC4P31431 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.24□□□□□ -2.37
SDC4P31431 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.24□□□□□ -2.37
SDC4P31431 PAXBP1P1-201ENST00000449315 447 ntBASIC0.24□□□□□ -2.37
SDC4P31431 RPS20P10-201ENST00000451209 253 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.24□□□□□ -2.37
SDC4P31431 snoU13.18-201ENST00000459483 104 ntBASIC0.24□□□□□ -2.37
SDC4P31431 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.24□□□□□ -2.37
SDC4P31431 AC113410.1-201ENST00000505029 247 ntBASIC0.24□□□□□ -2.37
SDC4P31431 MIR3912-201ENST00000577566 105 ntBASIC0.24□□□□□ -2.37
SDC4P31431 MIR5695-201ENST00000579717 85 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.24□□□□□ -2.37
SDC4P31431 MIR3136-201ENST00000583498 78 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AC174048.1-201ENST00000603389 144 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AL022154.1-201ENST00000604698 785 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.24□□□□□ -2.37
SDC4P31431 AC124016.2-201ENST00000610058 665 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AC021506.2-201ENST00000612354 169 ntBASIC0.24□□□□□ -2.37
SDC4P31431 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AC104985.3-201ENST00000623479 597 ntBASIC0.24□□□□□ -2.37
SDC4P31431 AC099654.8-201ENST00000637757 681 ntBASIC0.24□□□□□ -2.37
SDC4P31431 Y_RNA.269-201ENST00000364685 89 ntBASIC0.23□□□□□ -2.37
SDC4P31431 Y_RNA.355-201ENST00000365462 98 ntBASIC0.23□□□□□ -2.37
SDC4P31431 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SDC4P31431 MIR598-201ENST00000384868 97 ntBASIC0.23□□□□□ -2.37
SDC4P31431 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
SDC4P31431 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.23□□□□□ -2.37
SDC4P31431 AL953862.1-201ENST00000423016 168 ntBASIC0.23□□□□□ -2.37
SDC4P31431 MTCO2P1-201ENST00000424648 477 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.23□□□□□ -2.37
SDC4P31431 RPL23AP95-201ENST00000426806 265 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AC092423.1-201ENST00000430165 186 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.23□□□□□ -2.37
SDC4P31431 AC092991.1-201ENST00000477176 376 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AC091435.1-201ENST00000505442 584 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AC105758.1-201ENST00000506038 399 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AC119751.4-201ENST00000507498 357 ntBASIC0.23□□□□□ -2.37
SDC4P31431 OR8K2P-201ENST00000524645 927 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AC021231.3-201ENST00000558497 370 ntBASIC0.23□□□□□ -2.37
SDC4P31431 TPRKBP2-201ENST00000565969 475 ntBASIC0.23□□□□□ -2.37
SDC4P31431 KC877982.1-201ENST00000602313 470 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AL513534.2-201ENST00000603836 250 ntBASIC0.23□□□□□ -2.37
SDC4P31431 AL353149.1-201ENST00000610667 244 ntBASIC0.23□□□□□ -2.37
SDC4P31431 SNORD3E-202ENST00000627253 216 ntBASIC0.23□□□□□ -2.37
SDC4P31431 MTND4P14-201ENST00000435799 1354 ntBASIC0.22□□□□□ -2.37
SDC4P31431 SNORA33-201ENST00000363664 130 ntBASIC0.22□□□□□ -2.37
SDC4P31431 RNU6-236P-201ENST00000363886 106 ntBASIC0.22□□□□□ -2.37
SDC4P31431 RNU5A-8P-201ENST00000364102 114 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms