Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.45□□□□□ -1.86
CNGA1P29973 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.45□□□□□ -1.86
CNGA1P29973 AC021231.3-201ENST00000558497 370 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 MIR3136-201ENST00000583498 78 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.45□□□□□ -1.86
CNGA1P29973 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CNGA1P29973 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CNGA1P29973 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CNGA1P29973 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.44□□□□□ -1.86
CNGA1P29973 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.44□□□□□ -1.86
CNGA1P29973 RNU6-655P-201ENST00000362858 107 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 SNORA36A-201ENST00000384221 132 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 MIR559-201ENST00000385188 96 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 RNA5SP184-201ENST00000411071 108 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 AL358453.1-201ENST00000422522 250 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 RPL30P4-201ENST00000429309 333 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.44□□□□□ -1.86
CNGA1P29973 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.44□□□□□ -1.86
CNGA1P29973 AC090525.1-201ENST00000479116 478 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.44□□□□□ -1.86
CNGA1P29973 RNU6-470P-201ENST00000515954 104 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 RNU2-53P-201ENST00000516257 147 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 SNORA31.16-201ENST00000516773 139 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 Y_RNA.701-201ENST00000516812 110 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.44□□□□□ -1.86
CNGA1P29973 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.44□□□□□ -1.86
CNGA1P29973 MIR5701-3-201ENST00000578890 82 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 MIR5701-1-201ENST00000585138 82 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 AC044792.1-201ENST00000593294 196 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 AL078605.1-201ENST00000603529 500 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 AL080274.1-201ENST00000605565 220 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 MIR5701-2-201ENST00000615634 82 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 AC090971.5-201ENST00000621102 293 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 SCARNA4-201ENST00000629045 128 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 SNORD98-201ENST00000636377 67 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNGA1P29973 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNGA1P29973 AC080128.1-201ENST00000474389 1917 ntBASIC3.44□□□□□ -1.86
CNGA1P29973 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNGA1P29973 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.43□□□□□ -1.86
CNGA1P29973 RNU6-1115P-201ENST00000362490 106 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 RNY1P16-201ENST00000363063 111 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 CBX3P9-201ENST00000402326 552 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 U6atac.2-201ENST00000408644 118 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AL590135.1-201ENST00000422215 156 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AC019205.3-201ENST00000424573 156 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AL353997.1-201ENST00000432936 108 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 RPL23AP50-201ENST00000434149 455 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.43□□□□□ -1.86
CNGA1P29973 AC016700.2-201ENST00000446011 156 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AC091179.1-201ENST00000461606 579 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AF186996.7-201ENST00000492781 209 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AC015911.1-201ENST00000495111 156 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 HMGB1P35-201ENST00000503360 598 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AC083906.5-201ENST00000503722 328 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 AC022493.2-201ENST00000506122 481 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 RNA5SP217-201ENST00000515959 91 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 MIR3945-201ENST00000581853 98 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 MIR4435-1-201ENST00000582552 80 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 MIR4719-201ENST00000585233 84 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 RPL23AP88-201ENST00000605759 454 ntBASIC3.43□□□□□ -1.86
CNGA1P29973 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CNGA1P29973 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CNGA1P29973 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNGA1P29973 RNU4-82P-201ENST00000362443 140 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 RNU1-72P-201ENST00000362976 153 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 Y_RNA.197-201ENST00000364004 102 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 Y_RNA.395-201ENST00000383945 109 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 RPL21P3-201ENST00000395517 478 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.42□□□□□ -1.86
CNGA1P29973 AC244505.4-201ENST00000434905 287 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 SSXP5-201ENST00000443473 287 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 AC007677.1-201ENST00000445757 515 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 RPL30P10-201ENST00000488148 337 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 RPL17P19-201ENST00000489069 552 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 RPL23AP75-201ENST00000491601 451 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 RNU6-120P-201ENST00000516077 103 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.42□□□□□ -1.86
CNGA1P29973 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.42□□□□□ -1.86
CNGA1P29973 AC027176.1-201ENST00000560204 514 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 SUB1P3-201ENST00000564581 315 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 MIR3199-1-201ENST00000582434 88 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.42□□□□□ -1.86
CNGA1P29973 AL034555.1-201ENST00000604816 211 ntBASIC3.42□□□□□ -1.86
CNGA1P29973 RNU6-461P-201ENST00000364195 107 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 RNU4-9P-201ENST00000364951 139 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 SNORA51.4-201ENST00000364993 124 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 AL354751.2-201ENST00000415471 210 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 AL513477.1-202ENST00000417061 214 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.41□□□□□ -1.86
CNGA1P29973 AL353705.4-201ENST00000449661 238 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 AC108938.1-201ENST00000451204 136 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.41□□□□□ -1.86
CNGA1P29973 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.41□□□□□ -1.86
CNGA1P29973 RN7SKP210-201ENST00000459176 261 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 MIR2053-201ENST00000459295 91 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 RPL23AP70-201ENST00000483361 460 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 AC068781.1-201ENST00000488231 618 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 COX6CP5-201ENST00000527162 228 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 309.5 ms