Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNA5SP63-201ENST00000391225 112 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 RNU6-1245P-201ENST00000411130 106 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 MTATP6P20-201ENST00000414147 562 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.72□□□□□ -2.29
COL4A5P29400 UBE2V1P8-201ENST00000437166 265 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 CR769776.1-201ENST00000441254 787 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 MTCO1P44-201ENST00000441935 243 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A5P29400 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A5P29400 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.72□□□□□ -2.29
COL4A5P29400 AL163195.1-201ENST00000496941 348 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC098862.1-201ENST00000504991 413 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 SNORA19.3-201ENST00000516165 130 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 RNVU1-2-201ENST00000516326 135 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC115990.1-201ENST00000526957 301 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.72□□□□□ -2.29
COL4A5P29400 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A5P29400 MIR3169-201ENST00000578032 83 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.72□□□□□ -2.29
COL4A5P29400 AL121895.2-201ENST00000619558 447 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
COL4A5P29400 RNU6-23P-201ENST00000363283 107 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 RNU6-1274P-201ENST00000384557 107 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 RPL37P10-201ENST00000412884 288 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 RPL21P111-201ENST00000418453 477 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 RPS3AP37-201ENST00000419176 745 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 LARP1BP3-201ENST00000437229 869 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 AL008629.1-201ENST00000438615 184 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 RPL39P29-201ENST00000447779 157 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 AC132479.1-201ENST00000449160 144 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 RPL30P7-201ENST00000479312 323 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 AC005741.1-201ENST00000511094 432 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.71□□□□□ -2.3
COL4A5P29400 COPS8P3-201ENST00000526024 482 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 AP003122.4-201ENST00000530980 758 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 AC025678.1-201ENST00000567861 338 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 MIR3937-201ENST00000580135 106 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 AC023932.2-201ENST00000603176 175 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 AL136363.2-201ENST00000604173 851 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 RNU6-87P-201ENST00000607561 108 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.71□□□□□ -2.3
COL4A5P29400 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.71□□□□□ -2.3
COL4A5P29400 Z69720.2-201ENST00000624755 279 ntBASIC0.71□□□□□ -2.3
COL4A5P29400 SNORD56.1-201ENST00000362913 68 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 SNORD116.1-201ENST00000365628 92 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 RAP1BP3-201ENST00000407180 549 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 RNU2-39P-201ENST00000410604 198 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 RNA5SP25-201ENST00000410815 110 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.7□□□□□ -2.3
COL4A5P29400 MTCO2P21-201ENST00000419780 677 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 RPS25P9-201ENST00000435591 252 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 EEF1A1P39-201ENST00000440791 250 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL4A5P29400 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A5P29400 RPS26P55-201ENST00000471178 356 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 AC104982.1-201ENST00000478775 574 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A5P29400 MTND3P5-201ENST00000512798 333 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 RNU7-51P-201ENST00000516560 62 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.7□□□□□ -2.3
COL4A5P29400 HMGB1P33-201ENST00000563485 527 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 MIR5697-201ENST00000578045 78 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 MIR5094-201ENST00000578766 85 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 AC146944.4-201ENST00000602697 718 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 MIR8063-201ENST00000621930 81 ntBASIC0.7□□□□□ -2.3
COL4A5P29400 ZNF29P-201ENST00000225587 168 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 RNU6-112P-201ENST00000363599 104 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 Y_RNA.332-201ENST00000365271 113 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 RNU5E-7P-201ENST00000365290 117 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL4A5P29400 RNU6-142P-201ENST00000384019 107 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A5P29400 MTCO3P41-201ENST00000414801 328 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.69□□□□□ -2.3
COL4A5P29400 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A5P29400 RNU1-131P-201ENST00000458943 161 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AC010587.2-201ENST00000511727 448 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 SNORA43.2-201ENST00000516652 128 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 RNA5SP404-201ENST00000517118 132 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.69□□□□□ -2.3
COL4A5P29400 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A5P29400 AL158032.1-201ENST00000605401 106 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AC144521.1-201ENST00000607148 956 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
COL4A5P29400 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.69□□□□□ -2.3
COL4A5P29400 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
COL4A5P29400 RNU6-1019P-201ENST00000364424 107 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 MIR10A-201ENST00000385043 110 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 RNU2-70P-201ENST00000410718 179 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AL161935.2-201ENST00000414627 60 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 MTND5P2-201ENST00000442927 1142 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AL358794.1-201ENST00000445689 381 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.69□□□□□ -2.3
COL4A5P29400 AL122001.1-201ENST00000457027 370 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 RPL26P26-201ENST00000480251 434 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AC119751.4-201ENST00000507498 357 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms