Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SCARNA16.2-201ENST00000516520 172 ntBASIC2.22□□□□□ -2.05
SHC1P29353 AC109329.2-201ENST00000519658 482 ntBASIC2.22□□□□□ -2.05
SHC1P29353 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHC1P29353 SNRPGP18-201ENST00000553000 214 ntBASIC2.22□□□□□ -2.05
SHC1P29353 AL391261.3-201ENST00000557194 520 ntBASIC2.22□□□□□ -2.05
SHC1P29353 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.22□□□□□ -2.05
SHC1P29353 AC008121.1-201ENST00000603244 268 ntBASIC2.22□□□□□ -2.05
SHC1P29353 CYP2C61P-201ENST00000604072 290 ntBASIC2.22□□□□□ -2.05
SHC1P29353 MTND4LP5-201ENST00000605152 292 ntBASIC2.22□□□□□ -2.05
SHC1P29353 MIR3976-201ENST00000606807 139 ntBASIC2.22□□□□□ -2.05
SHC1P29353 AC040896.1-201ENST00000613819 479 ntBASIC2.22□□□□□ -2.05
SHC1P29353 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
SHC1P29353 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SHC1P29353 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
SHC1P29353 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHC1P29353 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SHC1P29353 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.21□□□□□ -2.06
SHC1P29353 MIR449A-201ENST00000362113 91 ntBASIC2.21□□□□□ -2.06
SHC1P29353 RNA5SP456-201ENST00000364002 114 ntBASIC2.21□□□□□ -2.06
SHC1P29353 RNU6-898P-201ENST00000365627 104 ntBASIC2.21□□□□□ -2.06
SHC1P29353 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHC1P29353 RNU6-692P-201ENST00000384496 107 ntBASIC2.21□□□□□ -2.06
SHC1P29353 SNORA75.6-201ENST00000391318 127 ntBASIC2.21□□□□□ -2.06
SHC1P29353 AL513475.1-201ENST00000406602 315 ntBASIC2.21□□□□□ -2.06
SHC1P29353 AL117339.3-201ENST00000418733 162 ntBASIC2.21□□□□□ -2.06
SHC1P29353 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SHC1P29353 AC009296.1-201ENST00000443146 155 ntBASIC2.21□□□□□ -2.06
SHC1P29353 AC013470.1-201ENST00000453438 462 ntBASIC2.21□□□□□ -2.06
SHC1P29353 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SHC1P29353 RNU6-1037P-201ENST00000459571 107 ntBASIC2.21□□□□□ -2.06
SHC1P29353 RPL9P9-202ENST00000466501 579 ntBASIC2.21□□□□□ -2.06
SHC1P29353 SMURF2P1-201ENST00000514992 481 ntBASIC2.21□□□□□ -2.06
SHC1P29353 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.21□□□□□ -2.06
SHC1P29353 AC022634.1-201ENST00000520765 532 ntBASIC2.21□□□□□ -2.06
SHC1P29353 LINC00933-203ENST00000559812 219 ntBASIC2.21□□□□□ -2.06
SHC1P29353 MIR4782-201ENST00000577987 79 ntBASIC2.21□□□□□ -2.06
SHC1P29353 AC103810.1-201ENST00000579873 453 ntBASIC2.21□□□□□ -2.06
SHC1P29353 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SHC1P29353 AC078795.3-201ENST00000602913 472 ntBASIC2.21□□□□□ -2.06
SHC1P29353 AL360085.1-201ENST00000604713 532 ntBASIC2.21□□□□□ -2.06
SHC1P29353 PART1_1.1-201ENST00000611761 217 ntBASIC2.21□□□□□ -2.06
SHC1P29353 AC011890.2-201ENST00000613393 294 ntBASIC2.21□□□□□ -2.06
SHC1P29353 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.21□□□□□ -2.06
SHC1P29353 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
SHC1P29353 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHC1P29353 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.2□□□□□ -2.06
SHC1P29353 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SHC1P29353 RNU6-1115P-201ENST00000362490 106 ntBASIC2.2□□□□□ -2.06
SHC1P29353 Y_RNA.48-201ENST00000362710 103 ntBASIC2.2□□□□□ -2.06
SHC1P29353 RNU6-942P-201ENST00000363002 107 ntBASIC2.2□□□□□ -2.06
SHC1P29353 Y_RNA.112-201ENST00000363250 102 ntBASIC2.2□□□□□ -2.06
SHC1P29353 SNORA63C-201ENST00000364578 129 ntBASIC2.2□□□□□ -2.06
SHC1P29353 RNU1-51P-201ENST00000365345 176 ntBASIC2.2□□□□□ -2.06
SHC1P29353 SNORA33.2-201ENST00000365413 134 ntBASIC2.2□□□□□ -2.06
SHC1P29353 SET-203ENST00000372688 801 ntTSL 2 BASIC2.2□□□□□ -2.06
SHC1P29353 RNU6-1040P-201ENST00000383974 107 ntBASIC2.2□□□□□ -2.06
SHC1P29353 Y_RNA.463-201ENST00000384271 102 ntBASIC2.2□□□□□ -2.06
SHC1P29353 RNU6-738P-201ENST00000384531 106 ntBASIC2.2□□□□□ -2.06
SHC1P29353 MIR606-201ENST00000384851 96 ntBASIC2.2□□□□□ -2.06
SHC1P29353 MIR888-201ENST00000401186 77 ntBASIC2.2□□□□□ -2.06
SHC1P29353 RNU6-174P-201ENST00000410406 106 ntBASIC2.2□□□□□ -2.06
SHC1P29353 RNU6-293P-201ENST00000411259 106 ntBASIC2.2□□□□□ -2.06
SHC1P29353 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.2□□□□□ -2.06
SHC1P29353 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.2□□□□□ -2.06
SHC1P29353 AC018865.2-201ENST00000423631 129 ntBASIC2.2□□□□□ -2.06
SHC1P29353 USMG5P1-201ENST00000425964 177 ntBASIC2.2□□□□□ -2.06
SHC1P29353 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
SHC1P29353 AL133396.1-201ENST00000432048 687 ntBASIC2.2□□□□□ -2.06
SHC1P29353 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.2□□□□□ -2.06
SHC1P29353 RPS27AP10-201ENST00000496103 208 ntBASIC2.2□□□□□ -2.06
SHC1P29353 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.2□□□□□ -2.06
SHC1P29353 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.2□□□□□ -2.06
SHC1P29353 MRPS36P2-201ENST00000512569 299 ntBASIC2.2□□□□□ -2.06
SHC1P29353 RNU6-470P-201ENST00000515954 104 ntBASIC2.2□□□□□ -2.06
SHC1P29353 RNU6-1137P-201ENST00000517073 99 ntBASIC2.2□□□□□ -2.06
SHC1P29353 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.2□□□□□ -2.06
SHC1P29353 AL355877.2-201ENST00000603670 358 ntBASIC2.2□□□□□ -2.06
SHC1P29353 AC116312.1-201ENST00000606841 314 ntBASIC2.2□□□□□ -2.06
SHC1P29353 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.2□□□□□ -2.06
SHC1P29353 U4.7-201ENST00000638126 106 ntBASIC2.2□□□□□ -2.06
SHC1P29353 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.2□□□□□ -2.06
SHC1P29353 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SHC1P29353 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
SHC1P29353 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
SHC1P29353 RNA5SP289-201ENST00000362332 137 ntBASIC2.19□□□□□ -2.06
SHC1P29353 Y_RNA.28-201ENST00000362554 111 ntBASIC2.19□□□□□ -2.06
SHC1P29353 RNA5SP393-201ENST00000363423 117 ntBASIC2.19□□□□□ -2.06
SHC1P29353 Y_RNA.202-201ENST00000364083 110 ntBASIC2.19□□□□□ -2.06
SHC1P29353 Y_RNA.496-201ENST00000384444 101 ntBASIC2.19□□□□□ -2.06
SHC1P29353 RNU6-790P-201ENST00000384479 105 ntBASIC2.19□□□□□ -2.06
SHC1P29353 SNORA80E-201ENST00000384744 137 ntBASIC2.19□□□□□ -2.06
SHC1P29353 AL359511.1-201ENST00000402970 211 ntBASIC2.19□□□□□ -2.06
SHC1P29353 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.19□□□□□ -2.06
SHC1P29353 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.19□□□□□ -2.06
SHC1P29353 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.19□□□□□ -2.06
SHC1P29353 MTND2P23-201ENST00000422990 651 ntBASIC2.19□□□□□ -2.06
SHC1P29353 BX276092.3-201ENST00000424182 230 ntBASIC2.19□□□□□ -2.06
SHC1P29353 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.19□□□□□ -2.06
SHC1P29353 RPS15AP7-201ENST00000439294 405 ntBASIC2.19□□□□□ -2.06
SHC1P29353 FO393415.2-201ENST00000480085 343 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms