Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.32□□□□□ -2.04
BDNFP23560 SNORA40.12-201ENST00000516329 111 ntBASIC2.32□□□□□ -2.04
BDNFP23560 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.32□□□□□ -2.04
BDNFP23560 EIF4A1P12-201ENST00000551910 141 ntBASIC2.32□□□□□ -2.04
BDNFP23560 AC078814.3-201ENST00000553036 491 ntBASIC2.32□□□□□ -2.04
BDNFP23560 AC005786.1-201ENST00000588553 154 ntBASIC2.32□□□□□ -2.04
BDNFP23560 AC025754.2-201ENST00000606491 432 ntBASIC2.32□□□□□ -2.04
BDNFP23560 AC017083.3-201ENST00000609955 700 ntBASIC2.32□□□□□ -2.04
BDNFP23560 AC009831.4-201ENST00000620744 325 ntBASIC2.32□□□□□ -2.04
BDNFP23560 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.32□□□□□ -2.04
BDNFP23560 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
BDNFP23560 LINC02555-201ENST00000563933 1951 ntBASIC2.31□□□□□ -2.04
BDNFP23560 Y_RNA.332-201ENST00000365271 113 ntBASIC2.31□□□□□ -2.04
BDNFP23560 RNU4-52P-201ENST00000384209 138 ntBASIC2.31□□□□□ -2.04
BDNFP23560 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
BDNFP23560 SNORA48.1-201ENST00000390879 135 ntBASIC2.31□□□□□ -2.04
BDNFP23560 SNORA12-201ENST00000391162 147 ntBASIC2.31□□□□□ -2.04
BDNFP23560 SNORA11.4-201ENST00000408823 129 ntBASIC2.31□□□□□ -2.04
BDNFP23560 RNA5SP501-201ENST00000410990 112 ntBASIC2.31□□□□□ -2.04
BDNFP23560 AC123900.1-201ENST00000420390 96 ntBASIC2.31□□□□□ -2.04
BDNFP23560 MTCO2P16-201ENST00000436962 677 ntBASIC2.31□□□□□ -2.04
BDNFP23560 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.31□□□□□ -2.04
BDNFP23560 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.31□□□□□ -2.04
BDNFP23560 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.31□□□□□ -2.04
BDNFP23560 MTND2P38-201ENST00000522536 667 ntBASIC2.31□□□□□ -2.04
BDNFP23560 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.31□□□□□ -2.04
BDNFP23560 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.31□□□□□ -2.04
BDNFP23560 VN1R80P-201ENST00000597126 338 ntBASIC2.31□□□□□ -2.04
BDNFP23560 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
BDNFP23560 PCGEM1.1-201ENST00000613431 131 ntBASIC2.31□□□□□ -2.04
BDNFP23560 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.31□□□□□ -2.04
BDNFP23560 AC139792.3-201ENST00000623525 224 ntBASIC2.31□□□□□ -2.04
BDNFP23560 SNORA67.3-201ENST00000384366 140 ntBASIC2.3□□□□□ -2.04
BDNFP23560 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
BDNFP23560 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.3□□□□□ -2.04
BDNFP23560 AC009310.1-201ENST00000414414 451 ntBASIC2.3□□□□□ -2.04
BDNFP23560 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.3□□□□□ -2.04
BDNFP23560 WARS2P1-201ENST00000429678 537 ntBASIC2.3□□□□□ -2.04
BDNFP23560 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.3□□□□□ -2.04
BDNFP23560 AL606489.2-201ENST00000433886 234 ntBASIC2.3□□□□□ -2.04
BDNFP23560 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.3□□□□□ -2.04
BDNFP23560 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.3□□□□□ -2.04
BDNFP23560 TPTE2P5-203ENST00000458118 728 ntBASIC2.3□□□□□ -2.04
BDNFP23560 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.3□□□□□ -2.04
BDNFP23560 RNA5SP401-201ENST00000515920 127 ntBASIC2.3□□□□□ -2.04
BDNFP23560 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
BDNFP23560 AC087441.2-201ENST00000529141 262 ntBASIC2.3□□□□□ -2.04
BDNFP23560 MIR5583-1-201ENST00000580941 59 ntBASIC2.3□□□□□ -2.04
BDNFP23560 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.3□□□□□ -2.04
BDNFP23560 MIR3611-201ENST00000584484 83 ntBASIC2.3□□□□□ -2.04
BDNFP23560 AC002984.1-201ENST00000591692 448 ntBASIC2.3□□□□□ -2.04
BDNFP23560 AC078795.3-201ENST00000602913 472 ntBASIC2.3□□□□□ -2.04
BDNFP23560 Z98751.3-201ENST00000604447 521 ntBASIC2.3□□□□□ -2.04
BDNFP23560 AP001330.5-201ENST00000607176 411 ntBASIC2.3□□□□□ -2.04
BDNFP23560 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
BDNFP23560 AL359697.1-201ENST00000624879 587 ntBASIC2.3□□□□□ -2.04
BDNFP23560 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
BDNFP23560 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
BDNFP23560 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
BDNFP23560 RNA5SP493-201ENST00000364115 91 ntBASIC2.29□□□□□ -2.04
BDNFP23560 AC068050.1-201ENST00000394891 380 ntBASIC2.29□□□□□ -2.04
BDNFP23560 AL663109.1-201ENST00000411498 844 ntBASIC2.29□□□□□ -2.04
BDNFP23560 NCOR1P3-201ENST00000420479 303 ntBASIC2.29□□□□□ -2.04
BDNFP23560 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.29□□□□□ -2.04
BDNFP23560 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.29□□□□□ -2.04
BDNFP23560 AC083798.1-201ENST00000472671 131 ntBASIC2.29□□□□□ -2.04
BDNFP23560 RNU5F-4P-201ENST00000516581 114 ntBASIC2.29□□□□□ -2.04
BDNFP23560 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
BDNFP23560 CENPUP1-201ENST00000526649 1202 ntBASIC2.29□□□□□ -2.04
BDNFP23560 GNAI2P1-201ENST00000541815 315 ntBASIC2.29□□□□□ -2.04
BDNFP23560 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.29□□□□□ -2.04
BDNFP23560 MIR4424-201ENST00000585257 86 ntBASIC2.29□□□□□ -2.04
BDNFP23560 AC005520.5-201ENST00000613926 164 ntBASIC2.29□□□□□ -2.04
BDNFP23560 AC103705.1-201ENST00000619013 241 ntBASIC2.29□□□□□ -2.04
BDNFP23560 AC009509.4-201ENST00000619202 509 ntBASIC2.29□□□□□ -2.04
BDNFP23560 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
BDNFP23560 RNU6-1026P-201ENST00000384465 108 ntBASIC2.28□□□□□ -2.04
BDNFP23560 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.28□□□□□ -2.04
BDNFP23560 YWHAEP4-201ENST00000505390 198 ntBASIC2.28□□□□□ -2.04
BDNFP23560 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.28□□□□□ -2.04
BDNFP23560 MIR449C-201ENST00000516047 92 ntBASIC2.28□□□□□ -2.04
BDNFP23560 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.28□□□□□ -2.04
BDNFP23560 AC022254.1-201ENST00000567857 235 ntBASIC2.28□□□□□ -2.04
BDNFP23560 MIR3198-2-201ENST00000577868 80 ntBASIC2.28□□□□□ -2.04
BDNFP23560 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.28□□□□□ -2.04
BDNFP23560 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
BDNFP23560 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.28□□□□□ -2.04
BDNFP23560 AC245008.1-201ENST00000608123 476 ntBASIC2.28□□□□□ -2.04
BDNFP23560 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.28□□□□□ -2.04
BDNFP23560 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.28□□□□□ -2.04
BDNFP23560 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
BDNFP23560 AC009541.1-201ENST00000438279 2662 ntBASIC2.28□□□□□ -2.04
BDNFP23560 RNU6-227P-201ENST00000362865 103 ntBASIC2.27□□□□□ -2.05
BDNFP23560 Y_RNA.359-201ENST00000365498 102 ntBASIC2.27□□□□□ -2.05
BDNFP23560 RNU6-1119P-201ENST00000384349 108 ntBASIC2.27□□□□□ -2.05
BDNFP23560 MIR208B-201ENST00000401172 77 ntBASIC2.27□□□□□ -2.05
BDNFP23560 AC012306.1-201ENST00000423267 114 ntBASIC2.27□□□□□ -2.05
BDNFP23560 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.27□□□□□ -2.05
BDNFP23560 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.27□□□□□ -2.05
BDNFP23560 AC087241.2-201ENST00000535801 324 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms