Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TNFSF4P23510 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFSF4P23510 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TNFSF4P23510 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
TNFSF4P23510 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFSF4P23510 RNU6-137P-201ENST00000363680 108 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 Y_RNA.187-201ENST00000363918 113 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 SNORA12.2-201ENST00000391040 156 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 UBA52P6-201ENST00000399822 382 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 RNU4-47P-201ENST00000410876 114 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 RNA5SP120-201ENST00000410900 112 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 RNU2-32P-201ENST00000411193 191 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 MTND4P28-201ENST00000426217 387 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 AC005326.1-201ENST00000429197 123 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 AL353997.1-201ENST00000432936 108 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 AC009238.1-201ENST00000442165 424 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 AC009237.6-201ENST00000446969 424 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 AC021205.2-201ENST00000480069 347 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 Y_RNA.706-201ENST00000516933 99 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.77□□□□□ -1.97
TNFSF4P23510 AC022616.8-201ENST00000533569 253 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFSF4P23510 AC026470.2-201ENST00000561492 181 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 AL356575.1-201ENST00000603008 283 ntBASIC2.77□□□□□ -1.97
TNFSF4P23510 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TNFSF4P23510 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.77□□□□□ -1.97
TNFSF4P23510 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFSF4P23510 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
TNFSF4P23510 MIR30E-201ENST00000362104 92 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 RNA5SP383-201ENST00000362934 120 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 Y_RNA.146-201ENST00000363549 102 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 SNORD115-8-201ENST00000363856 82 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 SNORD115-38-201ENST00000365037 82 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 RNU6-17P-201ENST00000384245 107 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 U8.10-201ENST00000384260 133 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 RNU6-18P-201ENST00000384527 107 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 SNORA12-201ENST00000391162 147 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 MIR320B2-201ENST00000408479 138 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 RPL19P1-201ENST00000411635 428 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 AC007098.1-201ENST00000420122 367 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 AC007215.1-201ENST00000464893 276 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 AC109925.1-201ENST00000478069 331 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.76□□□□□ -1.97
TNFSF4P23510 RNA5SP54-201ENST00000516951 92 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.76□□□□□ -1.97
TNFSF4P23510 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
TNFSF4P23510 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.76□□□□□ -1.97
TNFSF4P23510 MIR5680-201ENST00000577577 84 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 CYP2C61P-201ENST00000604072 290 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
TNFSF4P23510 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.76□□□□□ -1.97
TNFSF4P23510 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.76□□□□□ -1.97
TNFSF4P23510 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TNFSF4P23510 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
TNFSF4P23510 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
TNFSF4P23510 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
TNFSF4P23510 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TNFSF4P23510 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
TNFSF4P23510 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
TNFSF4P23510 MIR148B-201ENST00000362252 99 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 RNU6-1040P-201ENST00000383974 107 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 Y_RNA.405-201ENST00000383979 100 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 RNU6-26P-201ENST00000383985 107 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 Y_RNA.451-201ENST00000384200 100 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 Y_RNA.524-201ENST00000384564 100 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 Y_RNA.561-201ENST00000384694 100 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TNFSF4P23510 RPL32P35-201ENST00000415214 394 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 AF228730.4-201ENST00000421457 183 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 ARL5AP4-201ENST00000430731 512 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.75□□□□□ -1.97
TNFSF4P23510 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.75□□□□□ -1.97
TNFSF4P23510 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.75□□□□□ -1.97
TNFSF4P23510 AC022493.2-201ENST00000506122 481 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 RNU6-470P-201ENST00000515954 104 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 RN7SKP272-201ENST00000516988 232 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 SUB1P3-201ENST00000564581 315 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.75□□□□□ -1.97
TNFSF4P23510 AL133255.1-201ENST00000606374 441 ntBASIC2.75□□□□□ -1.97
TNFSF4P23510 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TNFSF4P23510 MTND4P29-201ENST00000503122 1372 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.74□□□□□ -1.97
TNFSF4P23510 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TNFSF4P23510 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.74□□□□□ -1.97
TNFSF4P23510 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
TNFSF4P23510 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TNFSF4P23510 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
TNFSF4P23510 Y_RNA.319-201ENST00000365138 92 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.74□□□□□ -1.97
TNFSF4P23510 Y_RNA.460-201ENST00000384255 102 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 Y_RNA.535-201ENST00000384612 99 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 RN7SKP123-201ENST00000410732 291 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 MTCO3P29-201ENST00000432119 779 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.74□□□□□ -1.97
TNFSF4P23510 AC115115.1-201ENST00000449927 248 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 AC091153.1-201ENST00000466297 402 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 AC008549.1-201ENST00000512900 643 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms