Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.79□□□□□ -2.28
CXCL3P19876 AC015911.1-201ENST00000495111 156 ntBASIC0.79□□□□□ -2.28
CXCL3P19876 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.79□□□□□ -2.28
CXCL3P19876 MTND4LP18-201ENST00000526864 291 ntBASIC0.79□□□□□ -2.28
CXCL3P19876 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.79□□□□□ -2.28
CXCL3P19876 MIR3664-201ENST00000579074 99 ntBASIC0.79□□□□□ -2.28
CXCL3P19876 HMGN1P30-201ENST00000589286 268 ntBASIC0.79□□□□□ -2.28
CXCL3P19876 AL391646.1-201ENST00000603860 190 ntBASIC0.79□□□□□ -2.28
CXCL3P19876 BX284668.6-201ENST00000606899 438 ntBASIC0.79□□□□□ -2.28
CXCL3P19876 AL031775.1-201ENST00000607014 887 ntBASIC0.79□□□□□ -2.28
CXCL3P19876 MIR6078-201ENST00000611069 100 ntBASIC0.79□□□□□ -2.28
CXCL3P19876 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CXCL3P19876 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CXCL3P19876 AC092268.1-201ENST00000342691 405 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 RNU1-76P-201ENST00000362903 159 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 RNU1-96P-201ENST00000364163 162 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 RNU6-1242P-201ENST00000391052 103 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 HIGD1AP15-201ENST00000416198 280 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.78□□□□□ -2.28
CXCL3P19876 AC010531.2-201ENST00000465012 153 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 AC074344.1-201ENST00000512823 224 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 AC104136.1-201ENST00000512969 394 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 RNU6-377P-201ENST00000515965 102 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 RN7SKP88-201ENST00000516847 250 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 RNU6-856P-201ENST00000516959 98 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 CYCSP23-201ENST00000519781 313 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 AC105148.1-201ENST00000604961 409 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 AC008945.2-201ENST00000606056 604 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 AC004492.1-201ENST00000607036 742 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 AL365434.2-201ENST00000607979 234 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 7SK.8-201ENST00000612110 250 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 PCGEM1.1-201ENST00000613431 131 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 7SK.11-201ENST00000615477 250 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 7SK.13-201ENST00000622040 250 ntBASIC0.78□□□□□ -2.28
CXCL3P19876 MIR378A-201ENST00000362177 66 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 RNU6-641P-201ENST00000384006 107 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 SNRPEP10-201ENST00000420249 274 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AC013410.2-201ENST00000422627 201 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.77□□□□□ -2.29
CXCL3P19876 RNU7-14P-201ENST00000459331 62 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AC034244.1-201ENST00000507687 207 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 RNU6-1098P-201ENST00000516772 96 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.77□□□□□ -2.29
CXCL3P19876 EIF4A1P12-201ENST00000551910 141 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AC091489.2-201ENST00000566263 604 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AP005136.1-201ENST00000579765 429 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 MIR4661-201ENST00000582720 75 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AC107304.1-201ENST00000604229 296 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AL022345.2-201ENST00000606307 135 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AL139418.1-201ENST00000613613 177 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AL031667.3-201ENST00000620124 655 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AL359740.1-201ENST00000624340 592 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AC019226.2-201ENST00000625973 424 ntBASIC0.77□□□□□ -2.29
CXCL3P19876 AL391987.6-201ENST00000305671 199 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 RNU6-1123P-201ENST00000362347 106 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 Y_RNA.22-201ENST00000362492 102 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 RNA5SP99-201ENST00000364020 114 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 RNU6-533P-201ENST00000384144 107 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 RNU6-83P-201ENST00000384568 112 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 MRPL42P2-201ENST00000403169 426 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 RNU6-293P-201ENST00000411259 106 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 COX6CP10-201ENST00000416832 224 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 POLR2J4-204ENST00000418424 324 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AL133396.1-201ENST00000432048 687 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AC000111.3-201ENST00000433478 193 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.76□□□□□ -2.29
CXCL3P19876 AC013470.1-201ENST00000453438 462 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AC087343.1-201ENST00000477341 475 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.76□□□□□ -2.29
CXCL3P19876 AC103851.1-201ENST00000506833 274 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 HSPE1P23-201ENST00000509838 286 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.76□□□□□ -2.29
CXCL3P19876 AC067942.3-201ENST00000512025 362 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AC112206.4-201ENST00000515142 405 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 RNU5F-4P-201ENST00000516581 114 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 SNORA31.16-201ENST00000516773 139 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 RNA5SP503-201ENST00000517047 117 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.76□□□□□ -2.29
CXCL3P19876 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.76□□□□□ -2.29
CXCL3P19876 RNU4-5P-201ENST00000607255 135 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AC040896.1-201ENST00000613819 479 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AC104010.1-201ENST00000616889 150 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 AL049777.1-201ENST00000622740 518 ntBASIC0.76□□□□□ -2.29
CXCL3P19876 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
CXCL3P19876 RNU6-179P-201ENST00000363350 107 ntBASIC0.75□□□□□ -2.29
CXCL3P19876 SNORD32A-201ENST00000364805 84 ntBASIC0.75□□□□□ -2.29
CXCL3P19876 SNORA72.2-201ENST00000365028 127 ntBASIC0.75□□□□□ -2.29
CXCL3P19876 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
CXCL3P19876 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CXCL3P19876 Y_RNA.608-201ENST00000410647 95 ntBASIC0.75□□□□□ -2.29
CXCL3P19876 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.75□□□□□ -2.29
CXCL3P19876 AC002486.1-201ENST00000435098 391 ntBASIC0.75□□□□□ -2.29
CXCL3P19876 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.75□□□□□ -2.29
CXCL3P19876 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.75□□□□□ -2.29
CXCL3P19876 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CXCL3P19876 RNU6-567P-201ENST00000516746 107 ntBASIC0.75□□□□□ -2.29
CXCL3P19876 AC023050.3-201ENST00000541142 333 ntBASIC0.75□□□□□ -2.29
CXCL3P19876 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms