Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.21□□□□□ -2.06
ERCC2P18074 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.21□□□□□ -2.06
ERCC2P18074 MIR5002-201ENST00000584713 97 ntBASIC2.21□□□□□ -2.06
ERCC2P18074 AC078795.3-201ENST00000602913 472 ntBASIC2.21□□□□□ -2.06
ERCC2P18074 AL078605.1-201ENST00000603529 500 ntBASIC2.21□□□□□ -2.06
ERCC2P18074 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ERCC2P18074 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
ERCC2P18074 MIR6873-201ENST00000622788 63 ntBASIC2.21□□□□□ -2.06
ERCC2P18074 MIR1248-201ENST00000629190 106 ntBASIC2.21□□□□□ -2.06
ERCC2P18074 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
ERCC2P18074 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ERCC2P18074 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
ERCC2P18074 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
ERCC2P18074 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.2□□□□□ -2.06
ERCC2P18074 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ERCC2P18074 RNU4-56P-201ENST00000364700 142 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 Y_RNA.373-201ENST00000365600 103 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 SNORA26.3-201ENST00000391119 136 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 SNORA3.2-201ENST00000408221 125 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 RNU4-26P-201ENST00000410270 107 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.2□□□□□ -2.06
ERCC2P18074 IPO7P1-201ENST00000442031 636 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.2□□□□□ -2.06
ERCC2P18074 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.2□□□□□ -2.06
ERCC2P18074 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.2□□□□□ -2.06
ERCC2P18074 RNU6-1332P-201ENST00000516666 104 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 MTND1P35-201ENST00000526739 508 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 FAM157A-202ENST00000615155 405 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 AC064859.1-201ENST00000624741 174 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 SNORA43.4-201ENST00000629559 138 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 AL450472.1-202ENST00000637286 180 ntBASIC2.2□□□□□ -2.06
ERCC2P18074 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ERCC2P18074 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ERCC2P18074 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.19□□□□□ -2.06
ERCC2P18074 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
ERCC2P18074 SNORD115-3-201ENST00000363100 82 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 SNORD32B-201ENST00000364460 84 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
ERCC2P18074 Y_RNA.402-201ENST00000383972 102 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 SNORA36A-201ENST00000384221 132 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
ERCC2P18074 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 MIR450B-201ENST00000401182 78 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 MIR1262-201ENST00000408276 93 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.19□□□□□ -2.06
ERCC2P18074 MTCO1P21-201ENST00000416634 589 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.19□□□□□ -2.06
ERCC2P18074 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.19□□□□□ -2.06
ERCC2P18074 SRIP2-201ENST00000428470 166 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 GPM6BP3-201ENST00000442797 145 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.19□□□□□ -2.06
ERCC2P18074 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.19□□□□□ -2.06
ERCC2P18074 RPL9P9-202ENST00000466501 579 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.19□□□□□ -2.06
ERCC2P18074 AC025465.4-201ENST00000513422 638 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 MIR449C-201ENST00000516047 92 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 Y_RNA.665-201ENST00000516177 98 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 AC109635.3-201ENST00000529536 185 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 ZNF519P2-201ENST00000557032 169 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.19□□□□□ -2.06
ERCC2P18074 MIR4529-201ENST00000578110 78 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.19□□□□□ -2.06
ERCC2P18074 AC104458.1-201ENST00000608243 463 ntBASIC2.19□□□□□ -2.06
ERCC2P18074 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.19□□□□□ -2.06
ERCC2P18074 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.19□□□□□ -2.06
ERCC2P18074 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ERCC2P18074 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ERCC2P18074 Y_RNA.9-201ENST00000362354 101 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 RNU6-1317P-201ENST00000364582 104 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 Y_RNA.256-201ENST00000364594 104 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 RNU4-12P-201ENST00000365233 139 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 RNU6-214P-201ENST00000384130 107 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 MIR518A2-201ENST00000384966 87 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 BTF3L4P2-201ENST00000392798 346 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 MTCYBP2-201ENST00000407745 171 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 MIR1294-201ENST00000408503 142 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 AL135786.1-201ENST00000415892 214 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.18□□□□□ -2.06
ERCC2P18074 MTND3P9-201ENST00000429526 346 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 MTND1P34-201ENST00000438556 671 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 AMD1P1-201ENST00000457220 922 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 RPS29P27-201ENST00000463711 170 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 PTP4A1P4-201ENST00000512479 322 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 HSPE1P18-201ENST00000517602 280 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.18□□□□□ -2.06
ERCC2P18074 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.18□□□□□ -2.06
ERCC2P18074 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.18□□□□□ -2.06
ERCC2P18074 MIR1273D-201ENST00000577266 86 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 MIR3923-201ENST00000579521 83 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 AC007229.1-201ENST00000590455 412 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 CTHRC1P1-201ENST00000605383 469 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.18□□□□□ -2.06
ERCC2P18074 AC009541.1-201ENST00000438279 2662 ntBASIC2.18□□□□□ -2.06
ERCC2P18074 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ERCC2P18074 AC131280.1-202ENST00000624067 4211 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RNU6-227P-201ENST00000362865 103 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms