Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU6-1037P-201ENST00000459571 107 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 SNRPGP7-201ENST00000469016 106 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 RNU6-314P-201ENST00000516574 104 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 Y_RNA.704-201ENST00000516851 102 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 RNU2-19P-201ENST00000517288 84 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.19□□□□□ -2.06
PDGFRAP16234 RNU6-323P-201ENST00000521915 107 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 AP005597.4-201ENST00000526762 229 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 HSPE1P4-201ENST00000550617 308 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.19□□□□□ -2.06
PDGFRAP16234 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.19□□□□□ -2.06
PDGFRAP16234 EIF1P4-201ENST00000572664 335 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 MIR5692C1-201ENST00000585309 91 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 AC063943.3-201ENST00000615562 356 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDGFRAP16234 MIR1321-201ENST00000637766 79 ntBASIC2.19□□□□□ -2.06
PDGFRAP16234 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PDGFRAP16234 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDGFRAP16234 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PDGFRAP16234 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.18□□□□□ -2.06
PDGFRAP16234 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PDGFRAP16234 OR4G1P-203ENST00000641984 1631 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
PDGFRAP16234 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.18□□□□□ -2.06
PDGFRAP16234 AC092268.1-201ENST00000342691 405 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 MIR181A1-201ENST00000385026 110 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 SNORA26.3-201ENST00000391119 136 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 EIF4E2P1-201ENST00000393781 255 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 AL590002.1-201ENST00000406554 418 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.18□□□□□ -2.06
PDGFRAP16234 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.18□□□□□ -2.06
PDGFRAP16234 ERLEC1P1-201ENST00000433806 578 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.18□□□□□ -2.06
PDGFRAP16234 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.18□□□□□ -2.06
PDGFRAP16234 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.18□□□□□ -2.06
PDGFRAP16234 AC016632.1-201ENST00000503994 196 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 SNORA19.2-201ENST00000516013 114 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 RNU6-720P-201ENST00000516363 108 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.18□□□□□ -2.06
PDGFRAP16234 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.18□□□□□ -2.06
PDGFRAP16234 AL357078.3-201ENST00000607528 618 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 AF250324.2-201ENST00000608299 610 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 AL121757.2-201ENST00000611223 313 ntBASIC2.18□□□□□ -2.06
PDGFRAP16234 FER-210ENST00000628534 558 ntTSL 5 BASIC2.18□□□□□ -2.06
PDGFRAP16234 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
PDGFRAP16234 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PDGFRAP16234 RNU6-522P-201ENST00000364497 107 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 SNORA40.19-201ENST00000390846 128 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 RNU4-26P-201ENST00000410270 107 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 AL590135.1-201ENST00000422215 156 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 AC019205.3-201ENST00000424573 156 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.17□□□□□ -2.06
PDGFRAP16234 AC016700.2-201ENST00000446011 156 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.17□□□□□ -2.06
PDGFRAP16234 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.17□□□□□ -2.06
PDGFRAP16234 AC107032.1-201ENST00000485945 480 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 AC015911.1-201ENST00000495111 156 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 AC091435.1-201ENST00000505442 584 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 AC004492.1-201ENST00000607036 742 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PDGFRAP16234 KPNA2P1-201ENST00000458289 1591 ntBASIC2.17□□□□□ -2.06
PDGFRAP16234 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PDGFRAP16234 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.16□□□□□ -2.06
PDGFRAP16234 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PDGFRAP16234 RNU4-56P-201ENST00000364700 142 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 RNU6-1329P-201ENST00000365664 107 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 AL359672.1-201ENST00000442302 409 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 PRELID3BP1-201ENST00000457142 540 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 PMCHL2-203ENST00000457791 237 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.16□□□□□ -2.06
PDGFRAP16234 AC145146.1-201ENST00000496370 254 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.16□□□□□ -2.06
PDGFRAP16234 Y_RNA.655-201ENST00000515919 96 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 SNORA31.16-201ENST00000516773 139 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 IGKV3-31-201ENST00000523109 329 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 TRAV32-201ENST00000553993 340 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.16□□□□□ -2.06
PDGFRAP16234 AC064836.2-201ENST00000609491 462 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 AC091932.3-201ENST00000624223 323 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.16□□□□□ -2.06
PDGFRAP16234 MIR219B-201ENST00000637023 88 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 AC068137.4-201ENST00000638485 296 ntBASIC2.16□□□□□ -2.06
PDGFRAP16234 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PDGFRAP16234 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PDGFRAP16234 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
PDGFRAP16234 RNY3P3-201ENST00000363816 102 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 SNORD32B-201ENST00000364460 84 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 RNA5SP160-201ENST00000364866 120 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 AL079342.1-201ENST00000401460 267 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 MTCYBP2-201ENST00000407745 171 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDGFRAP16234 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.15□□□□□ -2.07
PDGFRAP16234 AC010095.1-201ENST00000443543 144 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.15□□□□□ -2.07
PDGFRAP16234 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 AC008628.2-201ENST00000502605 298 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 YWHAEP4-201ENST00000505390 198 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms