Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL391001.1-201ENST00000602747 715 ntBASIC0.14□□□□□ -2.39
CFTRP13569 MIR3976-201ENST00000606807 139 ntBASIC0.14□□□□□ -2.39
CFTRP13569 RNU6-862P-201ENST00000362804 105 ntBASIC0.13□□□□□ -2.39
CFTRP13569 SNORA8.3-201ENST00000384679 139 ntBASIC0.13□□□□□ -2.39
CFTRP13569 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.13□□□□□ -2.39
CFTRP13569 MTCO3P29-201ENST00000432119 779 ntBASIC0.13□□□□□ -2.39
CFTRP13569 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.13□□□□□ -2.39
CFTRP13569 AC017083.3-201ENST00000609955 700 ntBASIC0.13□□□□□ -2.39
CFTRP13569 AC093913.1-201ENST00000614178 329 ntBASIC0.13□□□□□ -2.39
CFTRP13569 RNA5SP98-201ENST00000363158 137 ntBASIC0.12□□□□□ -2.39
CFTRP13569 RNA5SP390-201ENST00000410191 113 ntBASIC0.12□□□□□ -2.39
CFTRP13569 AC073910.1-201ENST00000445047 438 ntBASIC0.12□□□□□ -2.39
CFTRP13569 RPL39P38-201ENST00000467018 153 ntBASIC0.12□□□□□ -2.39
CFTRP13569 RPF2P2-201ENST00000504693 896 ntBASIC0.12□□□□□ -2.39
CFTRP13569 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.12□□□□□ -2.39
CFTRP13569 SNORA31.3-201ENST00000516029 96 ntBASIC0.12□□□□□ -2.39
CFTRP13569 SUMO2P16-201ENST00000519475 264 ntBASIC0.12□□□□□ -2.39
CFTRP13569 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.12□□□□□ -2.39
CFTRP13569 AC023538.1-201ENST00000534576 736 ntBASIC0.12□□□□□ -2.39
CFTRP13569 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.12□□□□□ -2.39
CFTRP13569 AL357075.2-201ENST00000614906 189 ntBASIC0.12□□□□□ -2.39
CFTRP13569 AL445264.1-201ENST00000621719 171 ntBASIC0.12□□□□□ -2.39
CFTRP13569 AC090625.1-201ENST00000357130 210 ntBASIC0.11□□□□□ -2.39
CFTRP13569 RNU6-549P-201ENST00000384433 107 ntBASIC0.11□□□□□ -2.39
CFTRP13569 SNORA80D-201ENST00000384488 135 ntBASIC0.11□□□□□ -2.39
CFTRP13569 RNU6-30P-201ENST00000384561 107 ntBASIC0.11□□□□□ -2.39
CFTRP13569 SNORA40C-201ENST00000391285 128 ntBASIC0.11□□□□□ -2.39
CFTRP13569 AL035398.1-201ENST00000430869 322 ntBASIC0.11□□□□□ -2.39
CFTRP13569 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.11□□□□□ -2.39
CFTRP13569 AC007000.2-201ENST00000442564 487 ntBASIC0.11□□□□□ -2.39
CFTRP13569 AC022493.2-201ENST00000506122 481 ntBASIC0.11□□□□□ -2.39
CFTRP13569 IGLVI-20-201ENST00000519296 130 ntBASIC0.11□□□□□ -2.39
CFTRP13569 MIR4493-201ENST00000584016 73 ntBASIC0.11□□□□□ -2.39
CFTRP13569 AC068620.3-201ENST00000602749 560 ntBASIC0.11□□□□□ -2.39
CFTRP13569 AL356094.1-201ENST00000624663 1212 ntBASIC0.11□□□□□ -2.39
CFTRP13569 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.11□□□□□ -2.39
CFTRP13569 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
CFTRP13569 Y_RNA.142-201ENST00000363491 102 ntBASIC0.1□□□□□ -2.39
CFTRP13569 Y_RNA.324-201ENST00000365165 102 ntBASIC0.1□□□□□ -2.39
CFTRP13569 RNU6-43P-201ENST00000384302 107 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AF228730.1-201ENST00000397972 663 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.1□□□□□ -2.39
CFTRP13569 ELOCP9-201ENST00000418624 239 ntBASIC0.1□□□□□ -2.39
CFTRP13569 MTND1P30-201ENST00000441241 901 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC069257.2-201ENST00000441819 155 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AL606662.1-201ENST00000445763 553 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.1□□□□□ -2.39
CFTRP13569 AL606517.1-201ENST00000446914 387 ntBASIC0.1□□□□□ -2.39
CFTRP13569 RPL39P36-201ENST00000490784 156 ntBASIC0.1□□□□□ -2.39
CFTRP13569 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.1□□□□□ -2.39
CFTRP13569 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.1□□□□□ -2.39
CFTRP13569 BNIP3P6-201ENST00000549284 499 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC108676.2-201ENST00000605225 163 ntBASIC0.1□□□□□ -2.39
CFTRP13569 MIR409-201ENST00000362237 79 ntBASIC0.1□□□□□ -2.39
CFTRP13569 RNU6-969P-201ENST00000383900 105 ntBASIC0.1□□□□□ -2.39
CFTRP13569 RNU6-166P-201ENST00000384371 107 ntBASIC0.1□□□□□ -2.39
CFTRP13569 ARL5AP1-201ENST00000418991 388 ntBASIC0.1□□□□□ -2.39
CFTRP13569 LARP1BP3-201ENST00000437229 869 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC245047.7-201ENST00000440265 293 ntBASIC0.1□□□□□ -2.39
CFTRP13569 ELOCP30-201ENST00000447108 299 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.1□□□□□ -2.39
CFTRP13569 AC233266.1-201ENST00000454518 96 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC025678.1-201ENST00000567861 338 ntBASIC0.1□□□□□ -2.39
CFTRP13569 MIR4709-201ENST00000577272 72 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AP001180.6-201ENST00000584918 159 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AP002906.1-201ENST00000603405 233 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC092106.3-201ENST00000611308 722 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC242852.1-201ENST00000612151 96 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC253576.2-201ENST00000618815 580 ntBASIC0.1□□□□□ -2.39
CFTRP13569 AC244015.1-201ENST00000622301 99 ntBASIC0.1□□□□□ -2.39
CFTRP13569 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.1□□□□□ -2.39
CFTRP13569 PCMTD1P7-201ENST00000634506 357 ntBASIC0.1□□□□□ -2.39
CFTRP13569 RNU6-1123P-201ENST00000362347 106 ntBASIC0.09□□□□□ -2.4
CFTRP13569 RNU6-343P-201ENST00000364709 104 ntBASIC0.09□□□□□ -2.4
CFTRP13569 RNU6-952P-201ENST00000391164 108 ntBASIC0.09□□□□□ -2.4
CFTRP13569 AC016831.2-201ENST00000417179 352 ntBASIC0.09□□□□□ -2.4
CFTRP13569 AC013262.1-201ENST00000426710 252 ntBASIC0.09□□□□□ -2.4
CFTRP13569 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
CFTRP13569 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
CFTRP13569 HMGB1P30-201ENST00000492455 606 ntBASIC0.09□□□□□ -2.4
CFTRP13569 AC112206.3-201ENST00000514578 389 ntBASIC0.09□□□□□ -2.4
CFTRP13569 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.09□□□□□ -2.4
CFTRP13569 KATNBL1P5-201ENST00000605015 517 ntBASIC0.09□□□□□ -2.4
CFTRP13569 AL360219.1-201ENST00000610230 366 ntBASIC0.09□□□□□ -2.4
CFTRP13569 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.09□□□□□ -2.4
CFTRP13569 AC240442.1-201ENST00000616055 283 ntBASIC0.09□□□□□ -2.4
CFTRP13569 Y_RNA.363-201ENST00000365529 113 ntBASIC0.08□□□□□ -2.4
CFTRP13569 RNU1-119P-201ENST00000391122 165 ntBASIC0.08□□□□□ -2.4
CFTRP13569 FABP5P4-201ENST00000437203 171 ntBASIC0.08□□□□□ -2.4
CFTRP13569 MTND4P25-201ENST00000441039 533 ntBASIC0.08□□□□□ -2.4
CFTRP13569 SNORA14.1-201ENST00000516113 141 ntBASIC0.08□□□□□ -2.4
CFTRP13569 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.08□□□□□ -2.4
CFTRP13569 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.08□□□□□ -2.4
CFTRP13569 AL031281.1-201ENST00000604049 488 ntBASIC0.08□□□□□ -2.4
CFTRP13569 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.08□□□□□ -2.4
CFTRP13569 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.08□□□□□ -2.4
CFTRP13569 AL159152.1-201ENST00000635019 2587 ntBASIC0.07□□□□□ -2.4
CFTRP13569 SNORD95.1-201ENST00000364099 68 ntBASIC0.07□□□□□ -2.4
CFTRP13569 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.07□□□□□ -2.4
CFTRP13569 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms