Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 MIR524-201ENST00000385242 87 ntBASIC2.55□□□□□ -2
ACTN1P12814 RNU6-876P-201ENST00000391295 104 ntBASIC2.55□□□□□ -2
ACTN1P12814 RNA5SP390-201ENST00000410191 113 ntBASIC2.55□□□□□ -2
ACTN1P12814 MTND5P6-201ENST00000422338 1798 ntBASIC2.55□□□□□ -2
ACTN1P12814 AL590632.1-201ENST00000424289 371 ntBASIC2.55□□□□□ -2
ACTN1P12814 EIF4EP4-201ENST00000424916 578 ntBASIC2.55□□□□□ -2
ACTN1P12814 AC008267.5-201ENST00000424928 265 ntBASIC2.55□□□□□ -2
ACTN1P12814 RPS15AP10-201ENST00000432472 382 ntBASIC2.55□□□□□ -2
ACTN1P12814 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
ACTN1P12814 AL139109.1-201ENST00000455491 297 ntBASIC2.55□□□□□ -2
ACTN1P12814 AMD1P1-201ENST00000457220 922 ntBASIC2.55□□□□□ -2
ACTN1P12814 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
ACTN1P12814 RNU2-53P-201ENST00000516257 147 ntBASIC2.55□□□□□ -2
ACTN1P12814 RNU6-256P-201ENST00000516747 97 ntBASIC2.55□□□□□ -2
ACTN1P12814 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.55□□□□□ -2
ACTN1P12814 uc_338.15-201ENST00000615470 191 ntBASIC2.55□□□□□ -2
ACTN1P12814 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.55□□□□□ -2
ACTN1P12814 AC244517.12-201ENST00000623581 663 ntBASIC2.55□□□□□ -2
ACTN1P12814 AC009033.1-201ENST00000624279 431 ntBASIC2.55□□□□□ -2
ACTN1P12814 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
ACTN1P12814 RNU6-1010P-201ENST00000362757 107 ntBASIC2.54□□□□□ -2
ACTN1P12814 AL079342.1-201ENST00000401460 267 ntBASIC2.54□□□□□ -2
ACTN1P12814 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.54□□□□□ -2
ACTN1P12814 RNU2-23P-201ENST00000410545 195 ntBASIC2.54□□□□□ -2
ACTN1P12814 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
ACTN1P12814 MICF-203ENST00000432679 129 ntBASIC2.54□□□□□ -2
ACTN1P12814 RPS15AP28-201ENST00000435088 386 ntBASIC2.54□□□□□ -2
ACTN1P12814 AC124916.1-201ENST00000444020 547 ntBASIC2.54□□□□□ -2
ACTN1P12814 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.54□□□□□ -2
ACTN1P12814 RNU4-49P-201ENST00000516080 140 ntBASIC2.54□□□□□ -2
ACTN1P12814 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.54□□□□□ -2
ACTN1P12814 AC026371.1-201ENST00000551867 419 ntBASIC2.54□□□□□ -2
ACTN1P12814 TRAV32-201ENST00000553993 340 ntBASIC2.54□□□□□ -2
ACTN1P12814 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
ACTN1P12814 AC018638.8-201ENST00000588755 281 ntBASIC2.54□□□□□ -2
ACTN1P12814 RPL30P11-203ENST00000598995 310 ntBASIC2.54□□□□□ -2
ACTN1P12814 AC007792.1-201ENST00000623023 402 ntBASIC2.54□□□□□ -2
ACTN1P12814 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.54□□□□□ -2
ACTN1P12814 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.53□□□□□ -2
ACTN1P12814 RNU1-72P-201ENST00000362976 153 ntBASIC2.53□□□□□ -2
ACTN1P12814 Y_RNA.160-201ENST00000363677 92 ntBASIC2.53□□□□□ -2
ACTN1P12814 RNU6-1317P-201ENST00000364582 104 ntBASIC2.53□□□□□ -2
ACTN1P12814 RPS29P13-201ENST00000402041 169 ntBASIC2.53□□□□□ -2
ACTN1P12814 MTND3P9-201ENST00000429526 346 ntBASIC2.53□□□□□ -2
ACTN1P12814 CR769767.1-201ENST00000436337 346 ntBASIC2.53□□□□□ -2
ACTN1P12814 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.53□□□□□ -2
ACTN1P12814 MTCO2P3-201ENST00000442543 421 ntBASIC2.53□□□□□ -2
ACTN1P12814 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.53□□□□□ -2
ACTN1P12814 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.53□□□□□ -2
ACTN1P12814 RNU6-1037P-201ENST00000459571 107 ntBASIC2.53□□□□□ -2
ACTN1P12814 AC018437.1-201ENST00000492214 406 ntBASIC2.53□□□□□ -2
ACTN1P12814 CKS1BP2-201ENST00000497342 240 ntBASIC2.53□□□□□ -2
ACTN1P12814 TRBVA-201ENST00000498804 316 ntBASIC2.53□□□□□ -2
ACTN1P12814 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.53□□□□□ -2
ACTN1P12814 AC116337.1-201ENST00000509680 687 ntBASIC2.53□□□□□ -2
ACTN1P12814 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
ACTN1P12814 AC093249.1-201ENST00000567049 203 ntBASIC2.53□□□□□ -2
ACTN1P12814 MIR3672-201ENST00000584290 82 ntBASIC2.53□□□□□ -2
ACTN1P12814 BNIP3P16-201ENST00000589779 534 ntBASIC2.53□□□□□ -2
ACTN1P12814 AC009248.2-201ENST00000619826 254 ntBASIC2.53□□□□□ -2
ACTN1P12814 AC090517.3-201ENST00000625170 141 ntBASIC2.53□□□□□ -2
ACTN1P12814 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
ACTN1P12814 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.53□□□□□ -2
ACTN1P12814 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.53□□□□□ -2
ACTN1P12814 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ACTN1P12814 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
ACTN1P12814 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.52□□□□□ -2.01
ACTN1P12814 MTND4P23-201ENST00000447723 1363 ntBASIC2.52□□□□□ -2.01
ACTN1P12814 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ACTN1P12814 RNA5SP125-201ENST00000364843 120 ntBASIC2.52□□□□□ -2.01
ACTN1P12814 U6atac.2-201ENST00000408644 118 ntBASIC2.52□□□□□ -2.01
ACTN1P12814 AC018634.1-201ENST00000437554 401 ntBASIC2.52□□□□□ -2.01
ACTN1P12814 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.52□□□□□ -2.01
ACTN1P12814 RPL9P9-202ENST00000466501 579 ntBASIC2.52□□□□□ -2.01
ACTN1P12814 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.52□□□□□ -2.01
ACTN1P12814 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
ACTN1P12814 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.52□□□□□ -2.01
ACTN1P12814 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.52□□□□□ -2.01
ACTN1P12814 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ACTN1P12814 snoU2_19.1-201ENST00000362361 80 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 RNU6-655P-201ENST00000362858 107 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 RNU6-43P-201ENST00000384302 107 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 RN7SKP32-201ENST00000410167 303 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 RNU6-325P-201ENST00000411132 105 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 SNAP23P1-201ENST00000433229 246 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 USP9YP28-201ENST00000435142 589 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.51□□□□□ -2.01
ACTN1P12814 AL031659.1-201ENST00000447075 539 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 RNU7-187P-201ENST00000458985 68 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.51□□□□□ -2.01
ACTN1P12814 AL121594.1-201ENST00000475906 575 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 AC096745.1-201ENST00000509945 370 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 AC091874.1-201ENST00000511402 339 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.51□□□□□ -2.01
ACTN1P12814 RNU6-612P-201ENST00000516909 102 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.51□□□□□ -2.01
ACTN1P12814 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.51□□□□□ -2.01
ACTN1P12814 MIR5571-201ENST00000577998 113 ntBASIC2.51□□□□□ -2.01
ACTN1P12814 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.51□□□□□ -2.01
ACTN1P12814 AC091135.1-201ENST00000585943 307 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms