Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 MTND3P25-201ENST00000509243 135 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 AC079140.3-201ENST00000511111 550 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 MTCO3P28-201ENST00000513351 515 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 RNU5A-4P-201ENST00000516588 111 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DQB2P05538 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DQB2P05538 MIR3136-201ENST00000583498 78 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 AC009033.1-201ENST00000624279 431 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 Z69720.2-201ENST00000624755 279 ntBASIC0.82□□□□□ -2.28
HLA-DQB2P05538 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
HLA-DQB2P05538 AL391516.1-201ENST00000554380 2449 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 RNU6-1019P-201ENST00000364424 107 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 RNU6-61P-201ENST00000365528 109 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 RNU6-438P-201ENST00000365561 103 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 RNU6-1065P-201ENST00000384513 106 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 MIR558-201ENST00000384920 94 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 MTCYBP36-201ENST00000404146 440 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 RNA5SP201-201ENST00000410316 124 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC137499.1-201ENST00000427602 88 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC000111.3-201ENST00000433478 193 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 SNORD116-28-201ENST00000516123 91 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 RNU6-685P-201ENST00000517088 95 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AL512310.8-201ENST00000550183 120 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC087883.1-201ENST00000551882 391 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 SNORA59B-202ENST00000578183 701 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.81□□□□□ -2.28
HLA-DQB2P05538 MIR5692A1-201ENST00000580523 69 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC012507.3-201ENST00000603556 477 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC004492.1-201ENST00000607036 742 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AC083806.3-201ENST00000614016 455 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 AL359740.1-201ENST00000624340 592 ntBASIC0.81□□□□□ -2.28
HLA-DQB2P05538 RNU6-862P-201ENST00000362804 105 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 RNU2-39P-201ENST00000410604 198 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 MTCO1P21-201ENST00000416634 589 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AC007283.2-201ENST00000424739 197 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 MED13P1-201ENST00000428342 171 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 ATP5J2P3-201ENST00000451550 258 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AC112204.1-201ENST00000502591 103 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AC109446.1-201ENST00000566172 220 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 AC136443.5-201ENST00000603741 370 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 MZT1P2-201ENST00000604387 248 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 MIR3976-201ENST00000606807 139 ntBASIC0.8□□□□□ -2.28
HLA-DQB2P05538 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.8□□□□□ -2.28
HLA-DQB2P05538 Y_RNA.22-201ENST00000362492 102 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 RNU6-83P-201ENST00000384568 112 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 RPS24P1-201ENST00000438550 371 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC132479.1-201ENST00000449160 144 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC016925.1-201ENST00000458303 298 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC114982.1-201ENST00000469402 321 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC010587.1-201ENST00000505809 469 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC117522.1-201ENST00000509821 380 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 MTND4LP18-201ENST00000526864 291 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AP001893.2-201ENST00000526949 202 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC011604.1-201ENST00000545978 196 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.79□□□□□ -2.28
HLA-DQB2P05538 RNU4-5P-201ENST00000607255 135 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AL451064.1-201ENST00000607718 471 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AL365434.2-201ENST00000607979 234 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC018645.2-201ENST00000609151 472 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC104010.1-201ENST00000616889 150 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AL607023.1-201ENST00000620045 248 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 MIR8065-201ENST00000620577 100 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AC027335.2-201ENST00000624030 375 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AL159152.1-201ENST00000635019 2587 ntBASIC0.79□□□□□ -2.28
HLA-DQB2P05538 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 RNU6-1141P-201ENST00000364520 107 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 SNORD31B-201ENST00000364977 69 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 SNORD114-22-201ENST00000365423 72 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 RNU6-43P-201ENST00000384302 107 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AL117342.1-201ENST00000404861 406 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 RN7SKP61-201ENST00000410642 295 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 RNU6-1245P-201ENST00000411130 106 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 ARL5AP1-201ENST00000418991 388 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms