Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU6-710P-201ENST00000410424 105 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 AL451074.5-201ENST00000415894 435 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 AL157831.1-201ENST00000426134 473 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 AL365496.1-201ENST00000426885 215 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 SNORA31.1-201ENST00000515993 133 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 SNORA31.5-201ENST00000516190 133 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 RNA5SP73-201ENST00000516744 108 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 HSPE1P18-201ENST00000517602 280 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 DEFB131C-201ENST00000528817 165 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 AC079598.5-201ENST00000547460 117 ntBASIC3.97□□□□□ -1.77
PDGFAP04085 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PDGFAP04085 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFAP04085 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PDGFAP04085 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFAP04085 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 RNA5SP307-201ENST00000362863 116 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 Y_RNA.121-201ENST00000363309 113 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 Y_RNA.238-201ENST00000364441 102 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PDGFAP04085 RNU6-763P-201ENST00000390865 106 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 U3.39-201ENST00000408569 239 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 HMGN2P20-201ENST00000437531 273 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFAP04085 Z75741.1-201ENST00000446793 314 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.96□□□□□ -1.78
PDGFAP04085 Y_RNA.637-201ENST00000459424 114 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 SUMO2P18-201ENST00000518873 252 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFAP04085 MIR548AI-201ENST00000579940 88 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 RPL17P51-201ENST00000605218 238 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 AC039056.2-201ENST00000622261 511 ntBASIC3.96□□□□□ -1.78
PDGFAP04085 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PDGFAP04085 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFAP04085 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFAP04085 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFAP04085 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PDGFAP04085 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFAP04085 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFAP04085 snoU2_19.1-201ENST00000362361 80 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RNA5SP295-201ENST00000362655 121 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RNU1-105P-201ENST00000363470 161 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U3.8-201ENST00000363675 217 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 SNORD115-30-201ENST00000364117 82 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RNA5SP387-201ENST00000364226 106 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RNU6-312P-201ENST00000364629 107 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 Y_RNA.272-201ENST00000364696 102 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 MIR767-201ENST00000390228 109 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 Y_RNA.580-201ENST00000391004 95 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 PTMAP2-201ENST00000397627 327 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 AL031003.1-201ENST00000404229 172 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RNU2-2P-201ENST00000410396 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RNA5SP504-201ENST00000410676 117 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 Z74021.1-201ENST00000423610 407 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RPL35AP15-201ENST00000468042 339 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 SNRPGP3-201ENST00000469405 227 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 AC136628.3-201ENST00000521868 290 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFAP04085 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFAP04085 AL670379.2-201ENST00000604983 252 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RNU2-4P-201ENST00000606190 192 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.15-201ENST00000611544 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.16-201ENST00000613119 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.12-201ENST00000613778 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.9-201ENST00000615427 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.11-201ENST00000616345 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.2-201ENST00000616535 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.3-201ENST00000617785 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.19-201ENST00000618602 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RNU2-1-201ENST00000618664 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.6-201ENST00000619225 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.5-201ENST00000619465 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 U2.10-201ENST00000620268 191 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 MIR6075-201ENST00000620782 95 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 AC006971.1-201ENST00000407916 4486 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFAP04085 AL136164.4-201ENST00000625013 2135 ntBASIC3.95□□□□□ -1.78
PDGFAP04085 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFAP04085 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFAP04085 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PDGFAP04085 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFAP04085 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.94□□□□□ -1.78
PDGFAP04085 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PDGFAP04085 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFAP04085 RNU6-1077P-201ENST00000410506 102 ntBASIC3.94□□□□□ -1.78
PDGFAP04085 RNU5E-9P-201ENST00000411164 104 ntBASIC3.94□□□□□ -1.78
PDGFAP04085 AL445584.1-201ENST00000431451 330 ntBASIC3.94□□□□□ -1.78
PDGFAP04085 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFAP04085 AC099522.1-202ENST00000514718 367 ntBASIC3.94□□□□□ -1.78
PDGFAP04085 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.94□□□□□ -1.78
PDGFAP04085 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFAP04085 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms