Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC106038.2-201ENST00000520706 568 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.94□□□□□ -2.26
COL4A1P02462 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.94□□□□□ -2.26
COL4A1P02462 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 AC079598.5-201ENST00000547460 117 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 MIR4299-201ENST00000577899 72 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RPL30P11-203ENST00000598995 310 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC008945.2-201ENST00000606056 604 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 uc_338.11-201ENST00000619132 160 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 AC093648.1-201ENST00000623546 606 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AL603839.4-201ENST00000624658 1005 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
COL4A1P02462 MIR924-201ENST00000638017 53 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 MTND5P9-201ENST00000503854 1755 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL4A1P02462 AC245060.5-201ENST00000610778 3293 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL4A1P02462 MIR330-201ENST00000362196 94 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU1-72P-201ENST00000362976 153 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-486P-201ENST00000363116 107 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-527P-201ENST00000363425 104 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-384P-201ENST00000364900 104 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 Y_RNA.324-201ENST00000365165 102 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-108P-201ENST00000365558 107 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-641P-201ENST00000384006 107 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 MIR544A-201ENST00000384855 91 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU2-23P-201ENST00000410545 195 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU2-48P-201ENST00000410694 191 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 UBE2V1P10-201ENST00000414685 269 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AL353621.1-201ENST00000418219 243 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.94□□□□□ -2.26
COL4A1P02462 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.94□□□□□ -2.26
COL4A1P02462 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.94□□□□□ -2.26
COL4A1P02462 AC006512.1-201ENST00000468816 291 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 MTND3P7-201ENST00000474435 343 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RPL30P1-201ENST00000488676 339 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC074344.1-201ENST00000512823 224 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC112206.3-201ENST00000514578 389 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 MIR892C-201ENST00000516410 77 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC087883.1-201ENST00000551882 391 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC136619.2-201ENST00000563361 631 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 MIR3682-201ENST00000581338 84 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.94□□□□□ -2.26
COL4A1P02462 AC119751.7-201ENST00000600494 245 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC073544.2-201ENST00000601155 540 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC090578.1-201ENST00000604955 591 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC092656.1-203ENST00000624134 423 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL4A1P02462 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
COL4A1P02462 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
COL4A1P02462 FARSBP1-201ENST00000435808 1778 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL4A1P02462 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL4A1P02462 RNU6-25P-201ENST00000383873 107 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNU6-1029P-201ENST00000384109 107 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNU6-48P-201ENST00000384161 107 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNU6-16P-201ENST00000384385 107 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNU6-843P-201ENST00000384454 104 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNU6-15P-201ENST00000384534 107 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNU6-29P-201ENST00000384637 107 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 SNORA40.19-201ENST00000390846 128 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNA5SP212-201ENST00000391223 107 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RPS3AP36-201ENST00000398190 775 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RN7SKP200-201ENST00000410564 320 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.93□□□□□ -2.26
COL4A1P02462 AC104850.1-201ENST00000435940 476 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 MTND1P26-201ENST00000440488 538 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.93□□□□□ -2.26
COL4A1P02462 MTCYBP1-201ENST00000454315 1119 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 KLF3P2-201ENST00000465138 268 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AC018437.1-201ENST00000492214 406 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.93□□□□□ -2.26
COL4A1P02462 AC009646.1-201ENST00000510455 318 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNU5F-2P-201ENST00000516066 82 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 RNU2-46P-201ENST00000517038 113 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AC022616.3-201ENST00000523940 148 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL4A1P02462 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
COL4A1P02462 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.93□□□□□ -2.26
COL4A1P02462 AC004812.1-201ENST00000540773 146 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AC098614.4-201ENST00000607601 462 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AC091304.9-201ENST00000612091 226 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AC023510.2-201ENST00000622162 746 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 AC010487.4-201ENST00000637027 61 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 MIR6086-201ENST00000638065 55 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL4A1P02462 MTND5P17-201ENST00000418405 1603 ntBASIC0.93□□□□□ -2.26
COL4A1P02462 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL4A1P02462 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
COL4A1P02462 SNORD3E-201ENST00000362899 217 ntBASIC0.92□□□□□ -2.26
COL4A1P02462 RNU6-1287P-201ENST00000362914 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms