Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ELOCP9-201ENST00000418624 239 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AL590556.1-201ENST00000423231 483 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 MTCYBP5-201ENST00000423752 1135 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AL589872.1-201ENST00000426602 288 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.59□□□□□ -2.32
COL1A1P02452 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.59□□□□□ -2.32
COL1A1P02452 NDUFB1P2-201ENST00000449477 176 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.59□□□□□ -2.32
COL1A1P02452 RNA5SP269-201ENST00000459032 137 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.59□□□□□ -2.32
COL1A1P02452 MIR5589-201ENST00000579442 60 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AL353778.1-201ENST00000603149 408 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
COL1A1P02452 AP000654.2-201ENST00000605633 586 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 BX284668.6-201ENST00000606899 438 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AC131235.4-201ENST00000609288 620 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AL355816.2-201ENST00000610049 647 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AC027335.2-201ENST00000624030 375 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 AC009033.1-201ENST00000624279 431 ntBASIC0.59□□□□□ -2.32
COL1A1P02452 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
COL1A1P02452 RNU6-212P-201ENST00000362642 104 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 Y_RNA.136-201ENST00000363444 102 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 RNY3P13-201ENST00000365542 102 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 SMIM11P1-201ENST00000369586 178 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 RNU6-413P-201ENST00000384115 107 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 RNU6-72P-201ENST00000384285 79 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 RNU6-298P-201ENST00000390888 96 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.58□□□□□ -2.32
COL1A1P02452 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.58□□□□□ -2.32
COL1A1P02452 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.58□□□□□ -2.32
COL1A1P02452 AC006026.2-201ENST00000457376 180 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 AC009646.1-201ENST00000510455 318 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.58□□□□□ -2.32
COL1A1P02452 RNU2-10P-201ENST00000516375 211 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 SCARNA1-201ENST00000517138 166 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 AP003327.1-201ENST00000529684 127 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.58□□□□□ -2.32
COL1A1P02452 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.58□□□□□ -2.32
COL1A1P02452 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.58□□□□□ -2.32
COL1A1P02452 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.58□□□□□ -2.32
COL1A1P02452 MZT1P2-201ENST00000604387 248 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 AL022345.2-201ENST00000606307 135 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 AC072039.2-201ENST00000608883 439 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 AC024940.5-201ENST00000622889 474 ntBASIC0.58□□□□□ -2.32
COL1A1P02452 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
COL1A1P02452 RNU5E-6P-201ENST00000365574 115 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 SNORD116-12-201ENST00000384468 92 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 RNU6-296P-201ENST00000384608 107 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 MRPL35P1-201ENST00000404272 572 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AL357139.1-201ENST00000407792 426 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.57□□□□□ -2.32
COL1A1P02452 PIGFP2-201ENST00000421400 651 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AC006366.1-201ENST00000422002 759 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
COL1A1P02452 RPS15AP10-201ENST00000432472 382 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
COL1A1P02452 OR2AQ1P-201ENST00000451972 200 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.57□□□□□ -2.32
COL1A1P02452 MTND2P33-201ENST00000506452 1031 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AC136628.3-201ENST00000521868 290 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.57□□□□□ -2.32
COL1A1P02452 AL356057.1-201ENST00000533798 831 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 BNIP3P6-201ENST00000549284 499 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AC022022.2-201ENST00000602989 360 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AL021879.1-201ENST00000611756 288 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AL159153.1-201ENST00000619688 317 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 AC068205.3-201ENST00000636385 468 ntBASIC0.57□□□□□ -2.32
COL1A1P02452 Y_RNA.110-201ENST00000363220 99 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 RNU4-22P-201ENST00000411058 166 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 RNU2-72P-201ENST00000411175 163 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.56□□□□□ -2.32
COL1A1P02452 AL606490.4-201ENST00000423117 127 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.56□□□□□ -2.32
COL1A1P02452 AC116353.3-201ENST00000511215 249 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 RNU6-1092P-201ENST00000516955 87 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
COL1A1P02452 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.56□□□□□ -2.32
COL1A1P02452 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.56□□□□□ -2.32
COL1A1P02452 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 MIR3146-201ENST00000580367 79 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 MIR544B-201ENST00000582372 78 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 AC010620.1-201ENST00000601088 1102 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 AC078795.2-201ENST00000602835 1252 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 AL138889.2-201ENST00000603883 242 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 RMST_4.1-201ENST00000616886 107 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 AL356596.1-201ENST00000624230 379 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.56□□□□□ -2.32
COL1A1P02452 AC092104.1-201ENST00000497346 1441 ntBASIC0.56□□□□□ -2.32
COL1A1P02452 RNU6-946P-201ENST00000383878 107 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 RNU2-7P-201ENST00000410794 178 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 RPL21P111-201ENST00000418453 477 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 SNX2P2-201ENST00000424553 323 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 RPS25P9-201ENST00000435591 252 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 HSPE1P9-201ENST00000440046 311 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.55□□□□□ -2.32
COL1A1P02452 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.55□□□□□ -2.32
COL1A1P02452 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.55□□□□□ -2.32
COL1A1P02452 RNU1-131P-201ENST00000458943 161 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms