Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC017083.3-201ENST00000609955 700 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AC139792.3-201ENST00000623525 224 ntBASIC1.35□□□□□ -2.19
HLA-DQA1P01909 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DQA1P01909 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 Y_RNA.51-201ENST00000362725 102 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 MIR29C-201ENST00000385231 88 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 MIR1294-201ENST00000408503 142 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 RNU2-20P-201ENST00000410425 191 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC079140.5-201ENST00000507882 310 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 SNORA40.12-201ENST00000516329 111 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 HSPE1P18-201ENST00000517602 280 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC069113.1-201ENST00000517763 267 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AL118558.2-201ENST00000556294 238 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.34□□□□□ -2.19
HLA-DQA1P01909 VN1R107P-201ENST00000601784 209 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC078795.3-201ENST00000602913 472 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC068944.2-201ENST00000610373 403 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 Z99129.1-201ENST00000612510 255 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC005296.1-201ENST00000616145 209 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AC068792.1-201ENST00000621354 417 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 MIR219B-201ENST00000637023 88 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 AL450472.1-202ENST00000637286 180 ntBASIC1.34□□□□□ -2.19
HLA-DQA1P01909 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
HLA-DQA1P01909 SNORD114-6-201ENST00000364393 72 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 SNORA36A-201ENST00000384221 132 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 SNORD116-2-201ENST00000384274 95 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 SNORD116-6-201ENST00000384711 96 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 RN7SKP284-201ENST00000411002 343 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AL663109.1-201ENST00000411498 844 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 RPL23AP95-201ENST00000426806 265 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AC078809.1-201ENST00000427601 140 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 RPL7P54-201ENST00000438336 674 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AC245102.2-201ENST00000448956 180 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 HMGN2P18-201ENST00000450680 270 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 TPTE2P5-203ENST00000458118 728 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 RPL38P4-201ENST00000502376 214 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AC104383.1-201ENST00000530297 370 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AC109446.1-201ENST00000566172 220 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 MIR3941-201ENST00000582572 103 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 MIR3136-201ENST00000583498 78 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 VN1R80P-201ENST00000597126 338 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AC243960.4-201ENST00000600532 288 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AP001836.1-201ENST00000604675 523 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 AC087241.4-201ENST00000612441 480 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.33□□□□□ -2.2
HLA-DQA1P01909 MTND5P26-201ENST00000426018 1752 ntBASIC1.33□□□□□ -2.2
HLA-DQA1P01909 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.32□□□□□ -2.2
HLA-DQA1P01909 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RNU1-58P-201ENST00000362413 163 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 Y_RNA.378-201ENST00000365652 113 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RNU6-38P-201ENST00000384085 107 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 SNORA70B-201ENST00000384210 135 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 SNORA8-201ENST00000384574 139 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RN7SKP61-201ENST00000410642 295 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RNU2-66P-201ENST00000410650 161 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RNA5SP501-201ENST00000410990 112 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AL158823.1-201ENST00000418441 478 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AL133396.1-201ENST00000432048 687 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RNU6-261P-201ENST00000459506 102 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RNA5SP401-201ENST00000515920 127 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 SNORA14.1-201ENST00000516113 141 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 RNU6-405P-201ENST00000516637 110 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DQA1P01909 MIR4648-201ENST00000580107 72 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AP001330.5-201ENST00000607176 411 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AL022345.1-201ENST00000607292 135 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 MIR6863-201ENST00000636112 90 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 AP000560.1-201ENST00000624150 1937 ntBASIC1.32□□□□□ -2.2
HLA-DQA1P01909 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 RNU4-20P-201ENST00000365601 151 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 SNORA69-201ENST00000383895 132 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 RNU6-26P-201ENST00000383985 107 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 RNU6-259P-201ENST00000383999 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms