Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RPL23AP91-201ENST00000569211 455 ntBASIC-0.02□□□□□ -2.41
TNFP01375 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.02□□□□□ -2.41
TNFP01375 Z98751.3-201ENST00000604447 521 ntBASIC-0.02□□□□□ -2.41
TNFP01375 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.03□□□□□ -2.41
TNFP01375 AC013262.1-201ENST00000426710 252 ntBASIC-0.03□□□□□ -2.41
TNFP01375 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.03□□□□□ -2.41
TNFP01375 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.03□□□□□ -2.41
TNFP01375 AL606517.1-201ENST00000446914 387 ntBASIC-0.03□□□□□ -2.41
TNFP01375 AL162395.1-201ENST00000457882 422 ntBASIC-0.03□□□□□ -2.41
TNFP01375 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
TNFP01375 AC114981.1-201ENST00000503897 678 ntBASIC-0.03□□□□□ -2.41
TNFP01375 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.03□□□□□ -2.41
TNFP01375 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.03□□□□□ -2.41
TNFP01375 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.03□□□□□ -2.41
TNFP01375 MTND1P22-201ENST00000510572 951 ntBASIC-0.03□□□□□ -2.41
TNFP01375 AP001189.2-201ENST00000527320 189 ntBASIC-0.03□□□□□ -2.41
TNFP01375 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.03□□□□□ -2.41
TNFP01375 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
TNFP01375 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.03□□□□□ -2.41
TNFP01375 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
TNFP01375 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.04□□□□□ -2.42
TNFP01375 RNU7-21P-201ENST00000459430 62 ntBASIC-0.04□□□□□ -2.42
TNFP01375 RNU7-140P-201ENST00000459546 60 ntBASIC-0.04□□□□□ -2.42
TNFP01375 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.04□□□□□ -2.42
TNFP01375 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.04□□□□□ -2.42
TNFP01375 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.04□□□□□ -2.42
TNFP01375 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.04□□□□□ -2.42
TNFP01375 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.04□□□□□ -2.42
TNFP01375 AC012414.2-201ENST00000559474 187 ntBASIC-0.04□□□□□ -2.42
TNFP01375 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.04□□□□□ -2.42
TNFP01375 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.04□□□□□ -2.42
TNFP01375 AC100810.6-201ENST00000638068 285 ntBASIC-0.04□□□□□ -2.42
TNFP01375 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.04□□□□□ -2.42
TNFP01375 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
TNFP01375 AL159152.1-201ENST00000635019 2587 ntBASIC-0.05□□□□□ -2.42
TNFP01375 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.05□□□□□ -2.42
TNFP01375 SNORD51.1-201ENST00000365405 77 ntBASIC-0.05□□□□□ -2.42
TNFP01375 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
TNFP01375 SNORA36.2-201ENST00000384004 127 ntBASIC-0.05□□□□□ -2.42
TNFP01375 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.05□□□□□ -2.42
TNFP01375 AC016831.2-201ENST00000417179 352 ntBASIC-0.05□□□□□ -2.42
TNFP01375 AC244098.3-201ENST00000424803 96 ntBASIC-0.05□□□□□ -2.42
TNFP01375 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.05□□□□□ -2.42
TNFP01375 SNRPEP8-201ENST00000442866 260 ntBASIC-0.05□□□□□ -2.42
TNFP01375 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.05□□□□□ -2.42
TNFP01375 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.05□□□□□ -2.42
TNFP01375 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.05□□□□□ -2.42
TNFP01375 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.05□□□□□ -2.42
TNFP01375 AL136520.1-202ENST00000555494 763 ntBASIC-0.05□□□□□ -2.42
TNFP01375 AC025627.3-201ENST00000582078 182 ntBASIC-0.05□□□□□ -2.42
TNFP01375 BNIP3P9-201ENST00000603714 553 ntBASIC-0.05□□□□□ -2.42
TNFP01375 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.05□□□□□ -2.42
TNFP01375 AL357080.1-201ENST00000617394 239 ntBASIC-0.05□□□□□ -2.42
TNFP01375 AL159153.1-201ENST00000619688 317 ntBASIC-0.05□□□□□ -2.42
TNFP01375 SNORD114-9-201ENST00000364370 72 ntBASIC-0.06□□□□□ -2.42
TNFP01375 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.06□□□□□ -2.42
TNFP01375 RNU6-166P-201ENST00000384371 107 ntBASIC-0.06□□□□□ -2.42
TNFP01375 SNORA75.2-201ENST00000391138 150 ntBASIC-0.06□□□□□ -2.42
TNFP01375 SNORA75.3-201ENST00000391231 150 ntBASIC-0.06□□□□□ -2.42
TNFP01375 SNORA40C-201ENST00000391285 128 ntBASIC-0.06□□□□□ -2.42
TNFP01375 RPS25P9-201ENST00000435591 252 ntBASIC-0.06□□□□□ -2.42
TNFP01375 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.06□□□□□ -2.42
TNFP01375 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.06□□□□□ -2.42
TNFP01375 MTCO3P28-201ENST00000513351 515 ntBASIC-0.06□□□□□ -2.42
TNFP01375 AC007834.2-201ENST00000536310 343 ntBASIC-0.06□□□□□ -2.42
TNFP01375 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.06□□□□□ -2.42
TNFP01375 AC067863.3-201ENST00000624172 122 ntBASIC-0.06□□□□□ -2.42
TNFP01375 CASC19-280ENST00000642102 1351 ntBASIC-0.06□□□□□ -2.42
TNFP01375 SNORD32B-201ENST00000364460 84 ntBASIC-0.07□□□□□ -2.42
TNFP01375 SNORA16.2-201ENST00000390991 127 ntBASIC-0.07□□□□□ -2.42
TNFP01375 SNORA12.2-201ENST00000391040 156 ntBASIC-0.07□□□□□ -2.42
TNFP01375 AL355796.1-201ENST00000406706 323 ntBASIC-0.07□□□□□ -2.42
TNFP01375 RN7SKP266-201ENST00000410232 287 ntBASIC-0.07□□□□□ -2.42
TNFP01375 MTCO3P41-201ENST00000414801 328 ntBASIC-0.07□□□□□ -2.42
TNFP01375 MTND5P14-201ENST00000441481 1267 ntBASIC-0.07□□□□□ -2.42
TNFP01375 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.07□□□□□ -2.42
TNFP01375 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.07□□□□□ -2.42
TNFP01375 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.07□□□□□ -2.42
TNFP01375 RNU7-90P-201ENST00000459216 62 ntBASIC-0.07□□□□□ -2.42
TNFP01375 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.07□□□□□ -2.42
TNFP01375 AC027338.1-201ENST00000514840 825 ntBASIC-0.07□□□□□ -2.42
TNFP01375 RNU6-922P-201ENST00000516753 99 ntBASIC-0.07□□□□□ -2.42
TNFP01375 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.07□□□□□ -2.42
TNFP01375 SNRPGP1-201ENST00000553864 222 ntBASIC-0.07□□□□□ -2.42
TNFP01375 AC138915.2-201ENST00000569776 97 ntBASIC-0.07□□□□□ -2.42
TNFP01375 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
TNFP01375 AC080078.2-201ENST00000603766 501 ntBASIC-0.07□□□□□ -2.42
TNFP01375 AC116165.2-201ENST00000616705 206 ntBASIC-0.07□□□□□ -2.42
TNFP01375 AC253576.2-201ENST00000618815 580 ntBASIC-0.07□□□□□ -2.42
TNFP01375 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
TNFP01375 SNORA32.1-201ENST00000364514 115 ntBASIC-0.08□□□□□ -2.42
TNFP01375 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.08□□□□□ -2.42
TNFP01375 RNA5SP390-201ENST00000410191 113 ntBASIC-0.08□□□□□ -2.42
TNFP01375 AC000111.3-201ENST00000433478 193 ntBASIC-0.08□□□□□ -2.42
TNFP01375 AC005094.1-201ENST00000440420 368 ntBASIC-0.08□□□□□ -2.42
TNFP01375 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.08□□□□□ -2.42
TNFP01375 AC067940.1-201ENST00000458411 300 ntBASIC-0.08□□□□□ -2.42
TNFP01375 AL049830.1-201ENST00000468034 425 ntBASIC-0.08□□□□□ -2.42
TNFP01375 MTND2P33-201ENST00000506452 1031 ntBASIC-0.08□□□□□ -2.42
TNFP01375 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms