Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MIR4713-201ENST00000582691 75 ntBASIC1.75□□□□□ -2.13
MBD3O95983 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.75□□□□□ -2.13
MBD3O95983 BX248123.2-201ENST00000606318 124 ntBASIC1.75□□□□□ -2.13
MBD3O95983 AC008536.2-201ENST00000607284 349 ntBASIC1.75□□□□□ -2.13
MBD3O95983 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.75□□□□□ -2.13
MBD3O95983 RN7SL853P-201ENST00000617250 223 ntBASIC1.75□□□□□ -2.13
MBD3O95983 Z69908.1-201ENST00000622603 247 ntBASIC1.75□□□□□ -2.13
MBD3O95983 AC233981.2-201ENST00000611524 1614 ntBASIC1.75□□□□□ -2.13
MBD3O95983 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MBD3O95983 Y_RNA.77-201ENST00000362962 107 ntBASIC1.74□□□□□ -2.13
MBD3O95983 U8.2-201ENST00000363156 134 ntBASIC1.74□□□□□ -2.13
MBD3O95983 RNA5SP126-201ENST00000365092 109 ntBASIC1.74□□□□□ -2.13
MBD3O95983 Y_RNA.332-201ENST00000365271 113 ntBASIC1.74□□□□□ -2.13
MBD3O95983 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
MBD3O95983 RNU6-26P-201ENST00000383985 107 ntBASIC1.74□□□□□ -2.13
MBD3O95983 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC068050.1-201ENST00000394891 380 ntBASIC1.74□□□□□ -2.13
MBD3O95983 RNA5SP201-201ENST00000410316 124 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.74□□□□□ -2.13
MBD3O95983 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.74□□□□□ -2.13
MBD3O95983 AC090960.1-201ENST00000421072 306 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AL358453.1-201ENST00000422522 250 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AL035666.1-201ENST00000446195 348 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AL513124.1-201ENST00000450410 614 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AMD1P1-201ENST00000457220 922 ntBASIC1.74□□□□□ -2.13
MBD3O95983 RNU6-956P-201ENST00000458868 103 ntBASIC1.74□□□□□ -2.13
MBD3O95983 RNU7-180P-201ENST00000459240 63 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC145146.1-201ENST00000496370 254 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.74□□□□□ -2.13
MBD3O95983 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.74□□□□□ -2.13
MBD3O95983 AP005660.1-201ENST00000522972 293 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.74□□□□□ -2.13
MBD3O95983 HIF1AP1-201ENST00000553642 175 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC027807.1-201ENST00000559921 996 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.74□□□□□ -2.13
MBD3O95983 MIR3923-201ENST00000579521 83 ntBASIC1.74□□□□□ -2.13
MBD3O95983 MTATP6P3-201ENST00000581686 676 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC010900.2-201ENST00000604508 210 ntBASIC1.74□□□□□ -2.13
MBD3O95983 RPL17P51-201ENST00000605218 238 ntBASIC1.74□□□□□ -2.13
MBD3O95983 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
MBD3O95983 AC104073.3-201ENST00000610942 955 ntBASIC1.74□□□□□ -2.13
MBD3O95983 U2.17-201ENST00000611454 95 ntBASIC1.74□□□□□ -2.13
MBD3O95983 MIR3974-201ENST00000637126 96 ntBASIC1.74□□□□□ -2.13
MBD3O95983 CBX3P1-201ENST00000325243 554 ntBASIC1.73□□□□□ -2.13
MBD3O95983 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
MBD3O95983 RNU6-996P-201ENST00000365438 107 ntBASIC1.73□□□□□ -2.13
MBD3O95983 RNU6-160P-201ENST00000384591 107 ntBASIC1.73□□□□□ -2.13
MBD3O95983 SNORA40.18-201ENST00000391200 128 ntBASIC1.73□□□□□ -2.13
MBD3O95983 MIR1304-201ENST00000408243 91 ntBASIC1.73□□□□□ -2.13
MBD3O95983 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MBD3O95983 VN1R108P-201ENST00000431580 830 ntBASIC1.73□□□□□ -2.13
MBD3O95983 MTCO2P3-201ENST00000442543 421 ntBASIC1.73□□□□□ -2.13
MBD3O95983 RNU1-131P-201ENST00000458943 161 ntBASIC1.73□□□□□ -2.13
MBD3O95983 RNU7-63P-201ENST00000459054 62 ntBASIC1.73□□□□□ -2.13
MBD3O95983 AL163973.1-201ENST00000484753 577 ntBASIC1.73□□□□□ -2.13
MBD3O95983 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.73□□□□□ -2.13
MBD3O95983 AC016632.1-201ENST00000503994 196 ntBASIC1.73□□□□□ -2.13
MBD3O95983 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.73□□□□□ -2.13
MBD3O95983 AC091544.4-201ENST00000555268 342 ntBASIC1.73□□□□□ -2.13
MBD3O95983 AC087683.1-201ENST00000591187 441 ntBASIC1.73□□□□□ -2.13
MBD3O95983 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MBD3O95983 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
MBD3O95983 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
MBD3O95983 SNORA48.1-201ENST00000390879 135 ntBASIC1.72□□□□□ -2.13
MBD3O95983 RNA5SP501-201ENST00000410990 112 ntBASIC1.72□□□□□ -2.13
MBD3O95983 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.72□□□□□ -2.13
MBD3O95983 MTCO2P19-201ENST00000427513 598 ntBASIC1.72□□□□□ -2.13
MBD3O95983 AC073464.1-201ENST00000429823 534 ntBASIC1.72□□□□□ -2.13
MBD3O95983 CETN4P-201ENST00000432407 469 ntBASIC1.72□□□□□ -2.13
MBD3O95983 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.72□□□□□ -2.13
MBD3O95983 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.72□□□□□ -2.13
MBD3O95983 AC073415.1-201ENST00000449240 153 ntBASIC1.72□□□□□ -2.13
MBD3O95983 MTCO2P18-201ENST00000457151 658 ntBASIC1.72□□□□□ -2.13
MBD3O95983 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.72□□□□□ -2.13
MBD3O95983 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.72□□□□□ -2.13
MBD3O95983 RN7SKP298-201ENST00000515950 94 ntBASIC1.72□□□□□ -2.13
MBD3O95983 RNU6-567P-201ENST00000516746 107 ntBASIC1.72□□□□□ -2.13
MBD3O95983 AP003034.1-201ENST00000534621 422 ntBASIC1.72□□□□□ -2.13
MBD3O95983 AC090115.3-201ENST00000553218 849 ntBASIC1.72□□□□□ -2.13
MBD3O95983 AC104984.5-201ENST00000586878 94 ntBASIC1.72□□□□□ -2.13
MBD3O95983 AP001836.1-201ENST00000604675 523 ntBASIC1.72□□□□□ -2.13
MBD3O95983 AC005520.5-201ENST00000613926 164 ntBASIC1.72□□□□□ -2.13
MBD3O95983 MIR7974-201ENST00000615835 79 ntBASIC1.72□□□□□ -2.13
MBD3O95983 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.72□□□□□ -2.13
MBD3O95983 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
MBD3O95983 AC006026.1-201ENST00000444025 1803 ntBASIC1.72□□□□□ -2.13
MBD3O95983 WWP1P1-201ENST00000466609 2769 ntBASIC1.71□□□□□ -2.14
MBD3O95983 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
MBD3O95983 RNU6-82P-201ENST00000363970 107 ntBASIC1.71□□□□□ -2.14
MBD3O95983 AP000275.1-201ENST00000411943 390 ntBASIC1.71□□□□□ -2.14
MBD3O95983 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.71□□□□□ -2.14
MBD3O95983 AL590135.1-201ENST00000422215 156 ntBASIC1.71□□□□□ -2.14
MBD3O95983 AC019205.3-201ENST00000424573 156 ntBASIC1.71□□□□□ -2.14
MBD3O95983 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.71□□□□□ -2.14
MBD3O95983 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.71□□□□□ -2.14
MBD3O95983 AC016700.2-201ENST00000446011 156 ntBASIC1.71□□□□□ -2.14
MBD3O95983 HMGN2P18-201ENST00000450680 270 ntBASIC1.71□□□□□ -2.14
MBD3O95983 UBL5P3-201ENST00000475112 231 ntBASIC1.71□□□□□ -2.14
MBD3O95983 AC104564.1-201ENST00000493028 407 ntBASIC1.71□□□□□ -2.14
MBD3O95983 AC015911.1-201ENST00000495111 156 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms