Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC090617.7-201ENST00000623952 126 ntBASIC3.84□□□□□ -1.79
RAPGEF3O95398 MTND5P6-201ENST00000422338 1798 ntBASIC3.84□□□□□ -1.8
RAPGEF3O95398 HAUS6P2-201ENST00000433254 2404 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 AC117470.1-201ENST00000381974 330 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 SNORD116-20-201ENST00000384529 92 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 FTH1P15-201ENST00000406984 280 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 RNU6-1245P-201ENST00000411130 106 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 MTND4P19-201ENST00000446659 478 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.83□□□□□ -1.8
RAPGEF3O95398 MRPL42P6-201ENST00000486397 371 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.83□□□□□ -1.8
RAPGEF3O95398 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.83□□□□□ -1.8
RAPGEF3O95398 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.83□□□□□ -1.8
RAPGEF3O95398 SNORD19.2-201ENST00000516978 73 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.83□□□□□ -1.8
RAPGEF3O95398 SUB1P3-201ENST00000564581 315 ntBASIC3.83□□□□□ -1.8
RAPGEF3O95398 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.83□□□□□ -1.8
RAPGEF3O95398 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.83□□□□□ -1.8
RAPGEF3O95398 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.83□□□□□ -1.8
RAPGEF3O95398 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAPGEF3O95398 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RAPGEF3O95398 Y_RNA.132-201ENST00000363421 102 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 Y_RNA.338-201ENST00000365320 114 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 SNORA33.2-201ENST00000365413 134 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 AP000275.1-201ENST00000411943 390 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 AC243428.1-201ENST00000421099 264 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.82□□□□□ -1.8
RAPGEF3O95398 RPS29P27-201ENST00000463711 170 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 RN7SL499P-201ENST00000481141 276 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.82□□□□□ -1.8
RAPGEF3O95398 AC046143.2-201ENST00000609789 160 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 AC024581.2-201ENST00000619986 252 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 MIR3529-201ENST00000637713 78 ntBASIC3.82□□□□□ -1.8
RAPGEF3O95398 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.82□□□□□ -1.8
RAPGEF3O95398 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAPGEF3O95398 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAPGEF3O95398 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAPGEF3O95398 Y_RNA.31-201ENST00000362574 102 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.81□□□□□ -1.8
RAPGEF3O95398 AL359511.1-201ENST00000402970 211 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.81□□□□□ -1.8
RAPGEF3O95398 AC074117.2-201ENST00000417130 397 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.81□□□□□ -1.8
RAPGEF3O95398 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.81□□□□□ -1.8
RAPGEF3O95398 RPS15AP5-201ENST00000436276 388 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 AC099799.1-201ENST00000439809 192 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 AL161651.1-201ENST00000440882 223 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 AL031183.1-201ENST00000457667 207 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 RPL17P19-201ENST00000489069 552 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 AC022447.4-201ENST00000504053 364 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 MTND4LP22-201ENST00000508209 276 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.81□□□□□ -1.8
RAPGEF3O95398 RN7SKP43-201ENST00000516173 320 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 RNU6-581P-201ENST00000516214 105 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 RNA5SP281-201ENST00000516504 135 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 MIR5696-201ENST00000578474 85 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 AP001836.1-201ENST00000604675 523 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 AL356157.2-201ENST00000605122 111 ntBASIC3.81□□□□□ -1.8
RAPGEF3O95398 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAPGEF3O95398 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAPGEF3O95398 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAPGEF3O95398 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.8□□□□□ -1.8
RAPGEF3O95398 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.8□□□□□ -1.8
RAPGEF3O95398 RNA5SP139-201ENST00000364340 117 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 SNORA22B-201ENST00000383876 138 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 Y_RNA.428-201ENST00000384078 102 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 RNU6-784P-201ENST00000384330 106 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 RNA5SP252-201ENST00000391131 119 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 BTF3L4P2-201ENST00000392798 346 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 MTND3P9-201ENST00000429526 346 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 RPS12P2-201ENST00000439728 269 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 MED28P2-201ENST00000475771 317 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 AC006483.1-201ENST00000487308 313 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 RNU6-699P-201ENST00000517081 110 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 RN7SKP295-201ENST00000517264 153 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.8□□□□□ -1.8
RAPGEF3O95398 AC016925.2-201ENST00000605108 242 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 AL355802.3-201ENST00000607571 545 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 SNORA50A-202ENST00000629536 136 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 MTND5P9-201ENST00000503854 1755 ntBASIC3.8□□□□□ -1.8
RAPGEF3O95398 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.8□□□□□ -1.8
RAPGEF3O95398 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
RAPGEF3O95398 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAPGEF3O95398 ZNF299P-201ENST00000406845 1804 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF3O95398 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF3O95398 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF3O95398 RNU6-858P-201ENST00000362436 107 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 Y_RNA.216-201ENST00000364205 93 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 RNU1-115P-201ENST00000365329 160 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 RNU6-487P-201ENST00000365430 104 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 RNU6-639P-201ENST00000384074 107 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 SAR1AP2-201ENST00000392696 594 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 AC023141.4-201ENST00000412031 328 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.79□□□□□ -1.8
RAPGEF3O95398 SNORD116.3-201ENST00000517176 78 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.79□□□□□ -1.8
RAPGEF3O95398 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.79□□□□□ -1.8
RAPGEF3O95398 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms