Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCAF4O95104 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.91
SCAF4O95104 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.09□□□□□ -1.91
SCAF4O95104 HAUS6P2-201ENST00000433254 2404 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 RNU6-961P-201ENST00000363893 105 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 RNU6-886P-201ENST00000384319 105 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 RNU6-541P-201ENST00000384709 110 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 RPL21P65-201ENST00000406094 466 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 RNA5SP317-201ENST00000410176 116 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 RNA5SP311-201ENST00000411290 116 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.09□□□□□ -1.91
SCAF4O95104 AL358075.3-201ENST00000426289 226 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 AC078809.1-201ENST00000427601 140 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.09□□□□□ -1.91
SCAF4O95104 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.09□□□□□ -1.91
SCAF4O95104 RNA5SP315-201ENST00000516340 116 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 ACA59.2-201ENST00000517061 156 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 RNA5SP312-201ENST00000517068 116 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 CBX3P4-201ENST00000538909 354 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.09□□□□□ -1.91
SCAF4O95104 MIR3160-1-201ENST00000577972 85 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 AC090897.2-201ENST00000581715 130 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 HMGN2P15-201ENST00000585707 270 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 SNORD113-5-201ENST00000607261 78 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 AC137590.2-201ENST00000619709 240 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 MIR3529-201ENST00000637713 78 ntBASIC3.09□□□□□ -1.91
SCAF4O95104 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SCAF4O95104 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.09□□□□□ -1.92
SCAF4O95104 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SCAF4O95104 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SCAF4O95104 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCAF4O95104 ADAM3A-203ENST00000461344 2157 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 RBBP8P1-201ENST00000449447 1844 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 RNU6-487P-201ENST00000365430 104 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 RNU6-326P-201ENST00000365480 107 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 Y_RNA.570-201ENST00000384750 101 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 AC023141.4-201ENST00000412031 328 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.08□□□□□ -1.92
SCAF4O95104 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.08□□□□□ -1.92
SCAF4O95104 AC244670.1-201ENST00000436879 112 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.08□□□□□ -1.92
SCAF4O95104 SEPT14P8-201ENST00000508026 178 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 AC008011.1-201ENST00000545989 227 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 AC007224.1-201ENST00000564410 144 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.08□□□□□ -1.92
SCAF4O95104 MIR6867-201ENST00000610636 67 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 AL359198.2-201ENST00000611836 194 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 AL357075.2-201ENST00000614906 189 ntBASIC3.08□□□□□ -1.92
SCAF4O95104 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.08□□□□□ -1.92
SCAF4O95104 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCAF4O95104 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.08□□□□□ -1.92
SCAF4O95104 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
SCAF4O95104 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SCAF4O95104 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCAF4O95104 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.07□□□□□ -1.92
SCAF4O95104 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCAF4O95104 AC092268.1-201ENST00000342691 405 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 Y_RNA.44-201ENST00000362676 108 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 Y_RNA.83-201ENST00000363005 113 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RNU6-626P-201ENST00000363354 107 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RNA5SP399-201ENST00000364003 117 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RNA5SP97-201ENST00000365006 84 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RNU6-20P-201ENST00000384106 107 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 Y_RNA.446-201ENST00000384178 104 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 MIR134-201ENST00000385258 73 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SCAF4O95104 RNA5SP390-201ENST00000410191 113 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RNU5A-5P-201ENST00000411054 116 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RPS26P42-201ENST00000413485 326 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 AL691449.1-201ENST00000426570 421 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RPL39P29-201ENST00000447779 157 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 AL138752.1-201ENST00000452964 351 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 AL031183.1-201ENST00000457667 207 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 Y_RNA.644-201ENST00000459006 113 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RPL30P12-201ENST00000474666 353 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 Y_RNA.674-201ENST00000516362 113 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 RNU2-31P-201ENST00000516954 155 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.07□□□□□ -1.92
SCAF4O95104 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCAF4O95104 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCAF4O95104 MIR492-201ENST00000638676 116 ntBASIC3.07□□□□□ -1.92
SCAF4O95104 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.07□□□□□ -1.92
SCAF4O95104 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.07□□□□□ -1.92
SCAF4O95104 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SCAF4O95104 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCAF4O95104 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCAF4O95104 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SCAF4O95104 MIR372-201ENST00000362225 67 ntBASIC3.06□□□□□ -1.92
SCAF4O95104 RNA5SP197-201ENST00000363357 119 ntBASIC3.06□□□□□ -1.92
SCAF4O95104 RNU6-740P-201ENST00000364734 105 ntBASIC3.06□□□□□ -1.92
SCAF4O95104 RNU6-283P-201ENST00000364788 107 ntBASIC3.06□□□□□ -1.92
SCAF4O95104 DYNLT3P1-201ENST00000378574 347 ntBASIC3.06□□□□□ -1.92
SCAF4O95104 RNU1-13P-201ENST00000384499 162 ntBASIC3.06□□□□□ -1.92
SCAF4O95104 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SCAF4O95104 RNA5SP252-201ENST00000391131 119 ntBASIC3.06□□□□□ -1.92
SCAF4O95104 RNU6-651P-201ENST00000411040 105 ntBASIC3.06□□□□□ -1.92
SCAF4O95104 AL356095.1-201ENST00000417217 199 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms