Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
UPK1BO75841 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
UPK1BO75841 MIR449A-201ENST00000362113 91 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 RNU6-1097P-201ENST00000363586 107 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 U3.9-201ENST00000363823 204 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 RNU6-282P-201ENST00000365357 103 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 SNORA36A-201ENST00000384221 132 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 Y_RNA.504-201ENST00000384481 104 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 RNU6-297P-201ENST00000384636 107 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 MIR548B-201ENST00000385247 97 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
UPK1BO75841 RPS29P13-201ENST00000402041 169 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 RN7SKP61-201ENST00000410642 295 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK1BO75841 AC078809.1-201ENST00000427601 140 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 SNAP23P1-201ENST00000433229 246 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AL135790.2-201ENST00000437701 267 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK1BO75841 MTND1P18-201ENST00000448191 573 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 snoU13.30-201ENST00000458951 104 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 RNA5SP269-201ENST00000459032 137 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK1BO75841 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK1BO75841 SNORA25.17-201ENST00000517184 124 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 SUB1P3-201ENST00000564581 315 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 MIR4703-201ENST00000577728 79 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK1BO75841 MIR8081-201ENST00000611533 95 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 PCGEM1.1-201ENST00000613431 131 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AC122133.1-201ENST00000613964 233 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AP001506.1-201ENST00000615444 211 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AC007494.3-201ENST00000624660 743 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK1BO75841 AL159152.1-201ENST00000635019 2587 ntBASIC1.15□□□□□ -2.23
UPK1BO75841 AC100821.1-201ENST00000523153 2479 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
UPK1BO75841 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RNU6-862P-201ENST00000362804 105 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RNU6-552P-201ENST00000362869 119 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RNU6-203P-201ENST00000384038 104 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RNU6-434P-201ENST00000384376 107 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RNU6-456P-201ENST00000384493 107 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RNU6-1127P-201ENST00000384580 107 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RPL30P13-201ENST00000418873 348 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 UBE2V1P8-201ENST00000437166 265 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.14□□□□□ -2.23
UPK1BO75841 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.14□□□□□ -2.23
UPK1BO75841 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.14□□□□□ -2.23
UPK1BO75841 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 SCARNA18-201ENST00000459004 134 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RPL9P9-202ENST00000466501 579 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RPL26P26-201ENST00000480251 434 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AC079382.1-201ENST00000493346 557 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.14□□□□□ -2.23
UPK1BO75841 RNU5F-4P-201ENST00000516581 114 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 SNORA18.6-201ENST00000516792 115 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 RNA5SP437-201ENST00000517249 129 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AC060788.1-201ENST00000521318 469 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AP003072.2-201ENST00000527756 676 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.14□□□□□ -2.23
UPK1BO75841 MIR4648-201ENST00000580107 72 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.14□□□□□ -2.23
UPK1BO75841 AC064872.1-201ENST00000604823 1072 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 PRR13P7-201ENST00000605538 430 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AC006566.1-201ENST00000608943 513 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AC087241.4-201ENST00000612441 480 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 AL450472.1-202ENST00000637286 180 ntBASIC1.14□□□□□ -2.23
UPK1BO75841 ICE2P2-201ENST00000483823 2787 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 MTND4P14-201ENST00000435799 1354 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 RNU6-266P-201ENST00000364225 107 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 RNU4-48P-201ENST00000365559 182 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 MIR634-201ENST00000385208 97 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 SNORA40.18-201ENST00000391200 128 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.13□□□□□ -2.23
UPK1BO75841 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
UPK1BO75841 AL133396.1-201ENST00000432048 687 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.13□□□□□ -2.23
UPK1BO75841 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1BO75841 AL163973.1-201ENST00000484753 577 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.13□□□□□ -2.23
UPK1BO75841 LRRC34P2-201ENST00000514850 553 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 AC019176.1-201ENST00000518519 225 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1BO75841 AGGF1P4-201ENST00000568249 801 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1BO75841 RSL24D1P11-201ENST00000591045 491 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 VN1R107P-201ENST00000601784 209 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 Z98751.3-201ENST00000604447 521 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1BO75841 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UPK1BO75841 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.13□□□□□ -2.23
UPK1BO75841 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.13□□□□□ -2.23
UPK1BO75841 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
UPK1BO75841 AC092268.1-201ENST00000342691 405 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 SNORA72.3-201ENST00000365074 132 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 Y_RNA.480-201ENST00000384364 102 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms