Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3AO75631 AL356010.1-201ENST00000456364 102 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3AO75631 MTND3P5-201ENST00000512798 333 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 AC010493.1-201ENST00000513479 292 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 AC105417.1-201ENST00000514691 285 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3AO75631 AGGF1P4-201ENST00000568249 801 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 MIR5583-1-201ENST00000580941 59 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 MIR3136-201ENST00000583498 78 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 MIR4769-201ENST00000584126 77 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3AO75631 AC011494.1-201ENST00000596454 237 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 AC073648.5-201ENST00000603502 305 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 AL034555.1-201ENST00000604816 211 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 SNORD98-201ENST00000636377 67 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 MIR3974-201ENST00000637126 96 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 AC241585.2-209ENST00000638217 143 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 ELL2P3-201ENST00000457883 1602 ntBASIC1.57□□□□□ -2.16
UPK3AO75631 SNORA75-201ENST00000384158 137 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 RNU6-43P-201ENST00000384302 107 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 RNU6-482P-201ENST00000391068 107 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 RNU6-903P-201ENST00000391270 109 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.56□□□□□ -2.16
UPK3AO75631 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.56□□□□□ -2.16
UPK3AO75631 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3AO75631 NCOR1P3-201ENST00000420479 303 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC090960.1-201ENST00000421072 306 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 MTCYBP8-201ENST00000422855 651 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC073464.1-201ENST00000429823 534 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AL645568.3-201ENST00000433683 316 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AL360221.1-201ENST00000445989 335 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.56□□□□□ -2.16
UPK3AO75631 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3AO75631 RNU7-63P-201ENST00000459054 62 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC104564.1-201ENST00000493028 407 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3AO75631 AK3P2-201ENST00000507976 429 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 FAM206BP-201ENST00000510179 541 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3AO75631 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AL137161.1-201ENST00000532231 390 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3AO75631 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.56□□□□□ -2.16
UPK3AO75631 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.56□□□□□ -2.16
UPK3AO75631 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3AO75631 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 BNIP3P16-201ENST00000589779 534 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC119751.7-201ENST00000600494 245 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 AC025811.1-201ENST00000604312 472 ntBASIC1.56□□□□□ -2.16
UPK3AO75631 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UPK3AO75631 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
UPK3AO75631 RNU4-56P-201ENST00000364700 142 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 RNU6-827P-201ENST00000365553 106 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 RNU6-517P-201ENST00000384362 110 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 SNORA12-201ENST00000391162 147 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 AL117339.3-201ENST00000418733 162 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 AC010975.2-201ENST00000427781 588 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 MTATP6P17-201ENST00000431030 672 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 AL591806.2-201ENST00000433122 173 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 AC145146.1-201ENST00000496370 254 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 AC079140.5-201ENST00000507882 310 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK3AO75631 MIR449C-201ENST00000516047 92 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 AC069113.1-201ENST00000517763 267 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.55□□□□□ -2.16
UPK3AO75631 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.55□□□□□ -2.16
UPK3AO75631 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK3AO75631 HIF1AP1-201ENST00000553642 175 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 AC103996.1-201ENST00000555468 102 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 MIR3618-201ENST00000580330 88 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 MIR8081-201ENST00000611533 95 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UPK3AO75631 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
UPK3AO75631 ZNF72P-201ENST00000425869 1908 ntBASIC1.55□□□□□ -2.16
UPK3AO75631 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3AO75631 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK3AO75631 RNU4-15P-201ENST00000362613 141 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 RNA5SP493-201ENST00000364115 91 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 RNU6-1141P-201ENST00000364520 107 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 RNU4-42P-201ENST00000364738 142 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 Y_RNA.381-201ENST00000365666 102 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 Y_RNA.553-201ENST00000384670 102 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
UPK3AO75631 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK3AO75631 CYCSP49-201ENST00000420810 319 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AL590135.1-201ENST00000422215 156 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC019205.3-201ENST00000424573 156 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC244670.1-201ENST00000436879 112 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 MTCO1P19-201ENST00000443487 500 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.54□□□□□ -2.16
UPK3AO75631 AC007677.1-201ENST00000445757 515 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC016700.2-201ENST00000446011 156 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC013470.1-201ENST00000453438 462 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 RNU7-167P-201ENST00000459160 62 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 RPS3AP17-201ENST00000472594 777 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms