Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AC002076.2-201ENST00000617362 122 ntBASIC2.88□□□□□ -1.95
CNOT3O75175 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNOT3O75175 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.87□□□□□ -1.95
CNOT3O75175 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
CNOT3O75175 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNOT3O75175 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNOT3O75175 MIR22-201ENST00000362190 85 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 SNORD50.1-201ENST00000362987 71 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 Y_RNA.106-201ENST00000363189 100 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 RNU6-105P-201ENST00000363909 104 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 RNU6-713P-201ENST00000384761 107 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 SNORA69.1-201ENST00000390904 137 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 U3.26-201ENST00000391236 204 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 RNU6-1245P-201ENST00000411130 106 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 COTL1P1-201ENST00000422309 375 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 MTCO3P29-201ENST00000432119 779 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 AL591043.1-201ENST00000432461 424 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 AL731563.1-201ENST00000442202 214 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 AC025750.2-201ENST00000442609 450 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.87□□□□□ -1.95
CNOT3O75175 RNU7-87P-201ENST00000459343 62 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 AC097462.2-201ENST00000504623 481 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.87□□□□□ -1.95
CNOT3O75175 SNORA31.1-201ENST00000515993 133 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 SNORA31.5-201ENST00000516190 133 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 SNORA40.14-201ENST00000516543 86 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 SNORA43.2-201ENST00000516652 128 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 Y_RNA.715-201ENST00000517082 110 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 AL590705.4-201ENST00000532209 134 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.87□□□□□ -1.95
CNOT3O75175 MIR5696-201ENST00000578474 85 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 VN1R91P-201ENST00000594377 169 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 U2.1-201ENST00000618978 145 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 AC073308.1-201ENST00000623696 305 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 AL137790.1-201ENST00000634283 177 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CNOT3O75175 AC009541.1-201ENST00000438279 2662 ntBASIC2.87□□□□□ -1.95
CNOT3O75175 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.87□□□□□ -1.95
CNOT3O75175 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CNOT3O75175 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
CNOT3O75175 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNOT3O75175 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.86□□□□□ -1.95
CNOT3O75175 CUL1P1-201ENST00000509510 2425 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 RNU6-778P-201ENST00000363269 103 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 RNU6-1035P-201ENST00000384477 107 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 SNORD116-20-201ENST00000384529 92 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 AL139132.1-201ENST00000431587 344 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 AC107083.1-201ENST00000439643 279 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 RPL26P9-201ENST00000457466 433 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 SNRPGP7-201ENST00000469016 106 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 AC117440.1-201ENST00000474107 571 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 RPS29P20-201ENST00000489592 171 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 AC006445.2-201ENST00000510061 472 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 RN7SKP272-201ENST00000516988 232 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.86□□□□□ -1.95
CNOT3O75175 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.86□□□□□ -1.95
CNOT3O75175 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.86□□□□□ -1.95
CNOT3O75175 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.86□□□□□ -1.95
CNOT3O75175 RPS29P30-201ENST00000600975 111 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 U2.21-201ENST00000637295 81 ntBASIC2.86□□□□□ -1.95
CNOT3O75175 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CNOT3O75175 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.85□□□□□ -1.95
CNOT3O75175 AC022336.2-201ENST00000568966 2538 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 SNORA14A-201ENST00000364773 135 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 RNU6-1109P-201ENST00000391187 107 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNOT3O75175 MIR888-201ENST00000401186 77 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 RPS29P13-201ENST00000402041 169 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 MIR1252-201ENST00000408861 65 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 Y_RNA.618-201ENST00000410949 107 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNOT3O75175 AC098831.1-201ENST00000440661 216 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 DYNLT3P2-201ENST00000442517 295 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 OSTCP8-201ENST00000445117 448 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.85□□□□□ -1.95
CNOT3O75175 AC079354.2-201ENST00000453523 154 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 RPS29P27-201ENST00000463711 170 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 RNU6-397P-201ENST00000516226 104 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.85□□□□□ -1.95
CNOT3O75175 MIR5701-3-201ENST00000578890 82 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 MIR5701-1-201ENST00000585138 82 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.85□□□□□ -1.95
CNOT3O75175 MIR5701-2-201ENST00000615634 82 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 AC241585.2-209ENST00000638217 143 ntBASIC2.85□□□□□ -1.95
CNOT3O75175 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
CNOT3O75175 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.85□□□□□ -1.95
CNOT3O75175 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.85□□□□□ -1.95
CNOT3O75175 ADAM3A-203ENST00000461344 2157 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 SNORD56.1-201ENST00000362913 68 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 VTRNA1-1-201ENST00000363120 99 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 Y_RNA.405-201ENST00000383979 100 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 Y_RNA.451-201ENST00000384200 100 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 Y_RNA.524-201ENST00000384564 100 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 Y_RNA.526-201ENST00000384572 110 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 Y_RNA.561-201ENST00000384694 100 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 MIR518D-201ENST00000385014 87 ntBASIC2.84□□□□□ -1.95
CNOT3O75175 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms