Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF40O75150 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF40O75150 Z75741.1-201ENST00000446793 314 ntBASIC4.87□□□□□ -1.63
RNF40O75150 AC006445.2-201ENST00000510061 472 ntBASIC4.87□□□□□ -1.63
RNF40O75150 ACA59.2-201ENST00000517061 156 ntBASIC4.87□□□□□ -1.63
RNF40O75150 AC025281.1-201ENST00000567026 265 ntBASIC4.87□□□□□ -1.63
RNF40O75150 MIR5699-201ENST00000578903 90 ntBASIC4.87□□□□□ -1.63
RNF40O75150 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF40O75150 AL121932.1-201ENST00000605542 214 ntBASIC4.87□□□□□ -1.63
RNF40O75150 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF40O75150 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF40O75150 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF40O75150 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF40O75150 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF40O75150 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF40O75150 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF40O75150 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF40O75150 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RNF40O75150 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF40O75150 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF40O75150 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF40O75150 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF40O75150 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF40O75150 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RNF40O75150 RNA5SP479-201ENST00000364858 117 ntBASIC4.86□□□□□ -1.63
RNF40O75150 DYNLT3P1-201ENST00000378574 347 ntBASIC4.86□□□□□ -1.63
RNF40O75150 RNU6-1323P-201ENST00000384025 107 ntBASIC4.86□□□□□ -1.63
RNF40O75150 SNORD116-13-201ENST00000384408 92 ntBASIC4.86□□□□□ -1.63
RNF40O75150 AL139281.1-201ENST00000422120 335 ntBASIC4.86□□□□□ -1.63
RNF40O75150 AL365496.1-201ENST00000426885 215 ntBASIC4.86□□□□□ -1.63
RNF40O75150 RPL23AP82-202ENST00000427528 469 ntBASIC4.86□□□□□ -1.63
RNF40O75150 AC027124.2-201ENST00000428249 105 ntBASIC4.86□□□□□ -1.63
RNF40O75150 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF40O75150 HMGN2P20-201ENST00000437531 273 ntBASIC4.86□□□□□ -1.63
RNF40O75150 RPL23AP7-203ENST00000449021 469 ntBASIC4.86□□□□□ -1.63
RNF40O75150 CENPBD1P1-201ENST00000464061 469 ntBASIC4.86□□□□□ -1.63
RNF40O75150 AL020997.2-201ENST00000602607 184 ntBASIC4.86□□□□□ -1.63
RNF40O75150 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF40O75150 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF40O75150 AL159152.1-201ENST00000635019 2587 ntBASIC4.86□□□□□ -1.63
RNF40O75150 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF40O75150 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF40O75150 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RNF40O75150 RNU6-674P-201ENST00000363831 107 ntBASIC4.85□□□□□ -1.63
RNF40O75150 RNU1-82P-201ENST00000390851 165 ntBASIC4.85□□□□□ -1.63
RNF40O75150 AC004552.1-201ENST00000419089 348 ntBASIC4.85□□□□□ -1.63
RNF40O75150 AL591419.1-201ENST00000427423 339 ntBASIC4.85□□□□□ -1.63
RNF40O75150 RPS26P3-201ENST00000470205 348 ntBASIC4.85□□□□□ -1.63
RNF40O75150 AC090543.2-201ENST00000483963 348 ntBASIC4.85□□□□□ -1.63
RNF40O75150 AC004057.1-201ENST00000485827 348 ntBASIC4.85□□□□□ -1.63
RNF40O75150 RNU1-6P-201ENST00000516290 144 ntBASIC4.85□□□□□ -1.63
RNF40O75150 Y_RNA.685-201ENST00000516532 108 ntBASIC4.85□□□□□ -1.63
RNF40O75150 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF40O75150 EIF4A1P12-201ENST00000551910 141 ntBASIC4.85□□□□□ -1.63
RNF40O75150 AC027176.1-201ENST00000560204 514 ntBASIC4.85□□□□□ -1.63
RNF40O75150 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF40O75150 RMST_8.1-201ENST00000610287 165 ntBASIC4.85□□□□□ -1.63
RNF40O75150 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF40O75150 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF40O75150 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNF40O75150 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF40O75150 ASNSP1-201ENST00000518311 1939 ntBASIC4.84□□□□□ -1.63
RNF40O75150 MIR548B-201ENST00000385247 97 ntBASIC4.84□□□□□ -1.63
RNF40O75150 MIR513A2-201ENST00000385249 127 ntBASIC4.84□□□□□ -1.63
RNF40O75150 EIF4A1P3-201ENST00000411521 244 ntBASIC4.84□□□□□ -1.63
RNF40O75150 AL645608.4-201ENST00000423619 154 ntBASIC4.84□□□□□ -1.63
RNF40O75150 AC004975.1-201ENST00000428733 208 ntBASIC4.84□□□□□ -1.63
RNF40O75150 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF40O75150 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF40O75150 RNU6-437P-201ENST00000459408 95 ntBASIC4.84□□□□□ -1.63
RNF40O75150 AC025445.1-201ENST00000502728 300 ntBASIC4.84□□□□□ -1.63
RNF40O75150 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF40O75150 MIR5006-201ENST00000583027 110 ntBASIC4.84□□□□□ -1.63
RNF40O75150 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF40O75150 AC025521.1-201ENST00000621624 286 ntBASIC4.84□□□□□ -1.63
RNF40O75150 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF40O75150 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF40O75150 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF40O75150 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF40O75150 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
RNF40O75150 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RNF40O75150 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF40O75150 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RNF40O75150 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF40O75150 Y_RNA.52-201ENST00000362760 96 ntBASIC4.83□□□□□ -1.64
RNF40O75150 SNORD74.4-201ENST00000364129 80 ntBASIC4.83□□□□□ -1.64
RNF40O75150 SNORD18B-201ENST00000365659 72 ntBASIC4.83□□□□□ -1.64
RNF40O75150 SNORA18.2-201ENST00000383865 132 ntBASIC4.83□□□□□ -1.64
RNF40O75150 MIR518C-201ENST00000384822 101 ntBASIC4.83□□□□□ -1.64
RNF40O75150 MIR493-201ENST00000385254 89 ntBASIC4.83□□□□□ -1.64
RNF40O75150 H2AFZP5-201ENST00000446960 382 ntBASIC4.83□□□□□ -1.64
RNF40O75150 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF40O75150 AL162591.2-201ENST00000449634 317 ntBASIC4.83□□□□□ -1.64
RNF40O75150 RPS29P20-201ENST00000489592 171 ntBASIC4.83□□□□□ -1.64
RNF40O75150 RPL36AP21-201ENST00000490372 323 ntBASIC4.83□□□□□ -1.64
RNF40O75150 RNU6-1337P-201ENST00000516525 95 ntBASIC4.83□□□□□ -1.64
RNF40O75150 AP001781.1-201ENST00000530977 207 ntBASIC4.83□□□□□ -1.64
RNF40O75150 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF40O75150 AC021739.1-201ENST00000559631 174 ntBASIC4.83□□□□□ -1.64
RNF40O75150 AC093249.4-201ENST00000564755 259 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms