Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC016632.1-201ENST00000503994 196 ntBASIC2.16□□□□□ -2.06
SNX3O60493 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX3O60493 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX3O60493 RN7SKP132-201ENST00000516001 208 ntBASIC2.16□□□□□ -2.06
SNX3O60493 RNU1-104P-201ENST00000517280 175 ntBASIC2.16□□□□□ -2.06
SNX3O60493 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.16□□□□□ -2.06
SNX3O60493 AC021269.2-201ENST00000532318 330 ntBASIC2.16□□□□□ -2.06
SNX3O60493 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX3O60493 AL078605.1-201ENST00000603529 500 ntBASIC2.16□□□□□ -2.06
SNX3O60493 AC046143.2-201ENST00000609789 160 ntBASIC2.16□□□□□ -2.06
SNX3O60493 AL133215.3-201ENST00000609801 448 ntBASIC2.16□□□□□ -2.06
SNX3O60493 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.16□□□□□ -2.06
SNX3O60493 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.16□□□□□ -2.06
SNX3O60493 AC092608.2-201ENST00000624427 218 ntBASIC2.16□□□□□ -2.06
SNX3O60493 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.16□□□□□ -2.06
SNX3O60493 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.16□□□□□ -2.06
SNX3O60493 CASC19-280ENST00000642102 1351 ntBASIC2.15□□□□□ -2.07
SNX3O60493 AC092268.1-201ENST00000342691 405 ntBASIC2.15□□□□□ -2.07
SNX3O60493 RNU6-142P-201ENST00000384019 107 ntBASIC2.15□□□□□ -2.07
SNX3O60493 RNU1-148P-201ENST00000384472 162 ntBASIC2.15□□□□□ -2.07
SNX3O60493 MIR521-1-201ENST00000384902 87 ntBASIC2.15□□□□□ -2.07
SNX3O60493 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SNX3O60493 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
SNX3O60493 Y_RNA.597-201ENST00000410463 100 ntBASIC2.15□□□□□ -2.07
SNX3O60493 RNU2-52P-201ENST00000410680 190 ntBASIC2.15□□□□□ -2.07
SNX3O60493 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.15□□□□□ -2.07
SNX3O60493 AC009238.1-201ENST00000442165 424 ntBASIC2.15□□□□□ -2.07
SNX3O60493 GPM6BP3-201ENST00000442797 145 ntBASIC2.15□□□□□ -2.07
SNX3O60493 RPS3AP12-201ENST00000443616 753 ntBASIC2.15□□□□□ -2.07
SNX3O60493 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.15□□□□□ -2.07
SNX3O60493 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.15□□□□□ -2.07
SNX3O60493 AC009237.6-201ENST00000446969 424 ntBASIC2.15□□□□□ -2.07
SNX3O60493 AC130509.1-201ENST00000464158 433 ntBASIC2.15□□□□□ -2.07
SNX3O60493 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX3O60493 MTCO2P30-201ENST00000503662 364 ntBASIC2.15□□□□□ -2.07
SNX3O60493 PTP4A1P4-201ENST00000512479 322 ntBASIC2.15□□□□□ -2.07
SNX3O60493 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX3O60493 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.15□□□□□ -2.07
SNX3O60493 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX3O60493 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
SNX3O60493 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
SNX3O60493 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX3O60493 AC078795.3-201ENST00000602913 472 ntBASIC2.15□□□□□ -2.07
SNX3O60493 MIR3976-201ENST00000606807 139 ntBASIC2.15□□□□□ -2.07
SNX3O60493 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNX3O60493 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNX3O60493 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNX3O60493 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNX3O60493 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.14□□□□□ -2.07
SNX3O60493 Y_RNA.301-201ENST00000364990 103 ntBASIC2.14□□□□□ -2.07
SNX3O60493 SNORA25B-201ENST00000365507 128 ntBASIC2.14□□□□□ -2.07
SNX3O60493 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
SNX3O60493 RNU6-933P-201ENST00000384424 107 ntBASIC2.14□□□□□ -2.07
SNX3O60493 RN7SKP158-201ENST00000410453 326 ntBASIC2.14□□□□□ -2.07
SNX3O60493 RNU2-32P-201ENST00000411193 191 ntBASIC2.14□□□□□ -2.07
SNX3O60493 AC007064.1-201ENST00000412238 351 ntBASIC2.14□□□□□ -2.07
SNX3O60493 ARL5AP4-201ENST00000430731 512 ntBASIC2.14□□□□□ -2.07
SNX3O60493 IFNA20P-201ENST00000436840 528 ntBASIC2.14□□□□□ -2.07
SNX3O60493 AC107083.1-201ENST00000439643 279 ntBASIC2.14□□□□□ -2.07
SNX3O60493 MTND4LP16-201ENST00000440828 295 ntBASIC2.14□□□□□ -2.07
SNX3O60493 RNU6-329P-201ENST00000459618 107 ntBASIC2.14□□□□□ -2.07
SNX3O60493 AC104564.1-201ENST00000493028 407 ntBASIC2.14□□□□□ -2.07
SNX3O60493 AC145146.1-201ENST00000496370 254 ntBASIC2.14□□□□□ -2.07
SNX3O60493 AC114801.2-201ENST00000503825 781 ntBASIC2.14□□□□□ -2.07
SNX3O60493 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.14□□□□□ -2.07
SNX3O60493 AC010486.1-201ENST00000511793 424 ntBASIC2.14□□□□□ -2.07
SNX3O60493 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.14□□□□□ -2.07
SNX3O60493 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.14□□□□□ -2.07
SNX3O60493 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.14□□□□□ -2.07
SNX3O60493 ELOCP29-201ENST00000588193 334 ntBASIC2.14□□□□□ -2.07
SNX3O60493 SNORD14A-201ENST00000606526 91 ntBASIC2.14□□□□□ -2.07
SNX3O60493 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SNX3O60493 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
SNX3O60493 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNX3O60493 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNX3O60493 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SNX3O60493 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNX3O60493 Y_RNA.123-201ENST00000363338 102 ntBASIC2.13□□□□□ -2.07
SNX3O60493 SNORA70.4-201ENST00000365509 134 ntBASIC2.13□□□□□ -2.07
SNX3O60493 RNU6-1013P-201ENST00000384180 107 ntBASIC2.13□□□□□ -2.07
SNX3O60493 SNORA67.4-201ENST00000384688 142 ntBASIC2.13□□□□□ -2.07
SNX3O60493 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
SNX3O60493 SNORA12-201ENST00000391162 147 ntBASIC2.13□□□□□ -2.07
SNX3O60493 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.13□□□□□ -2.07
SNX3O60493 AL139413.1-201ENST00000421309 217 ntBASIC2.13□□□□□ -2.07
SNX3O60493 Z82209.1-201ENST00000422141 2135 ntBASIC2.13□□□□□ -2.07
SNX3O60493 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.13□□□□□ -2.07
SNX3O60493 PCMTD1P1-201ENST00000455560 355 ntBASIC2.13□□□□□ -2.07
SNX3O60493 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.13□□□□□ -2.07
SNX3O60493 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.13□□□□□ -2.07
SNX3O60493 RNU6-566P-201ENST00000516790 107 ntBASIC2.13□□□□□ -2.07
SNX3O60493 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.13□□□□□ -2.07
SNX3O60493 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.13□□□□□ -2.07
SNX3O60493 CYCSP26-201ENST00000534107 320 ntBASIC2.13□□□□□ -2.07
SNX3O60493 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.13□□□□□ -2.07
SNX3O60493 AC021231.3-201ENST00000558497 370 ntBASIC2.13□□□□□ -2.07
SNX3O60493 AC026464.5-201ENST00000562497 722 ntBASIC2.13□□□□□ -2.07
SNX3O60493 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.13□□□□□ -2.07
SNX3O60493 MIR4742-201ENST00000581069 85 ntBASIC2.13□□□□□ -2.07
SNX3O60493 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms