Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SNORD116-20-201ENST00000384529 92 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 HMGN2P8-201ENST00000391458 268 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 RNU2-37P-201ENST00000410695 177 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 AC096920.1-201ENST00000423991 241 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 RPS26P21-201ENST00000475397 348 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 TRBV12-2-201ENST00000489763 344 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 RPS23P5-201ENST00000495419 428 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.1□□□□□ -1.75
GRIN3BO60391 SNORA31.6-201ENST00000516241 130 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 AP001282.2-201ENST00000616149 309 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GRIN3BO60391 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
GRIN3BO60391 CUL1P1-201ENST00000509510 2425 ntBASIC4.1□□□□□ -1.75
GRIN3BO60391 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GRIN3BO60391 LINC02555-201ENST00000563933 1951 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GRIN3BO60391 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GRIN3BO60391 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.09□□□□□ -1.75
GRIN3BO60391 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.09□□□□□ -1.75
GRIN3BO60391 AC000403.1-201ENST00000613696 3585 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
GRIN3BO60391 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
GRIN3BO60391 RNU6-545P-201ENST00000362681 104 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 U3.39-201ENST00000408569 239 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 MIR548H3-201ENST00000408771 118 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 AC074117.2-201ENST00000417130 397 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 AL353705.1-201ENST00000433468 480 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 AC007969.2-201ENST00000441891 191 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.09□□□□□ -1.75
GRIN3BO60391 AL353705.4-201ENST00000449661 238 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.09□□□□□ -1.75
GRIN3BO60391 U8.22-201ENST00000459141 133 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 TOMM22P6-201ENST00000465035 409 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 RPL30P1-201ENST00000488676 339 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 RNA5SP367-201ENST00000516557 118 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 RNU5B-3P-201ENST00000516601 115 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 RNU6-1012P-201ENST00000516606 109 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.09□□□□□ -1.75
GRIN3BO60391 AC020895.1-201ENST00000595362 272 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 Y_RNA.772-201ENST00000606692 102 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 AC012531.5-201ENST00000611375 151 ntBASIC4.09□□□□□ -1.75
GRIN3BO60391 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.09□□□□□ -1.75
GRIN3BO60391 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
GRIN3BO60391 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.09□□□□□ -1.76
GRIN3BO60391 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
GRIN3BO60391 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
GRIN3BO60391 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GRIN3BO60391 SNORD81.1-201ENST00000363064 77 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 RNA5SP322-201ENST00000363617 119 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 RNU6-280P-201ENST00000364145 104 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 RNY1-201ENST00000364228 113 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 Y_RNA.297-201ENST00000364950 91 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 RNU1-89P-201ENST00000384592 164 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 SNORD78.2-201ENST00000391076 69 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 SNORD58.1-201ENST00000391313 66 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.08□□□□□ -1.76
GRIN3BO60391 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GRIN3BO60391 AC017079.2-201ENST00000416102 485 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 AC004383.1-201ENST00000438135 289 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.08□□□□□ -1.76
GRIN3BO60391 RN7SL93P-201ENST00000463035 293 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 MIR4300-201ENST00000581016 96 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 AC019159.1-201ENST00000605094 187 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 MIR376A1-201ENST00000616574 68 ntBASIC4.08□□□□□ -1.76
GRIN3BO60391 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GRIN3BO60391 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
GRIN3BO60391 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GRIN3BO60391 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
GRIN3BO60391 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
GRIN3BO60391 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
GRIN3BO60391 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GRIN3BO60391 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GRIN3BO60391 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 RNU6-1301P-201ENST00000362724 104 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 SNORD27-201ENST00000363981 72 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
GRIN3BO60391 Y_RNA.416-201ENST00000384014 113 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 RNU6-142P-201ENST00000384019 107 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 SNORA70B-201ENST00000384210 135 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 MIR153-2-201ENST00000385225 87 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 RNU1-139P-201ENST00000391307 165 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 MIR887-201ENST00000401258 79 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 MRPL35P1-201ENST00000404272 572 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 HSPE1P26-201ENST00000405341 275 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 AC003685.2-201ENST00000422795 395 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.07□□□□□ -1.76
GRIN3BO60391 NDUFB1P1-201ENST00000435191 180 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 HMGN2P10-201ENST00000448085 265 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 HMGN2P7-201ENST00000456186 273 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 HMGN2P16-201ENST00000456802 261 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 AC098869.1-201ENST00000481627 292 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 MRPL42P6-201ENST00000486397 371 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 AF186996.7-201ENST00000492781 209 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 RNU1-61P-201ENST00000516107 151 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 Y_RNA.683-201ENST00000516508 93 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 NDUFB9P3-201ENST00000521269 501 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
GRIN3BO60391 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.07□□□□□ -1.76
GRIN3BO60391 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms