Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AC107032.1-201ENST00000485945 480 ntBASIC3.12□□□□□ -1.91
PEX1O43933 AC132942.1-201ENST00000486753 483 ntBASIC3.12□□□□□ -1.91
PEX1O43933 RPL30P1-201ENST00000488676 339 ntBASIC3.12□□□□□ -1.91
PEX1O43933 AC093591.1-201ENST00000491435 481 ntBASIC3.12□□□□□ -1.91
PEX1O43933 RPL21P16-201ENST00000495531 483 ntBASIC3.12□□□□□ -1.91
PEX1O43933 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.12□□□□□ -1.91
PEX1O43933 SNORA40.15-201ENST00000516884 107 ntBASIC3.12□□□□□ -1.91
PEX1O43933 RNU6-570P-201ENST00000517051 105 ntBASIC3.12□□□□□ -1.91
PEX1O43933 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.12□□□□□ -1.91
PEX1O43933 AC010186.2-204ENST00000537668 439 ntBASIC3.12□□□□□ -1.91
PEX1O43933 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.12□□□□□ -1.91
PEX1O43933 AC130454.1-201ENST00000622948 401 ntBASIC3.12□□□□□ -1.91
PEX1O43933 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PEX1O43933 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PEX1O43933 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PEX1O43933 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PEX1O43933 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PEX1O43933 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
PEX1O43933 SNORA38.1-201ENST00000364172 131 ntBASIC3.11□□□□□ -1.91
PEX1O43933 RNU6-611P-201ENST00000384276 104 ntBASIC3.11□□□□□ -1.91
PEX1O43933 RNU6-1035P-201ENST00000384477 107 ntBASIC3.11□□□□□ -1.91
PEX1O43933 SNORD116-20-201ENST00000384529 92 ntBASIC3.11□□□□□ -1.91
PEX1O43933 SNORA26.7-201ENST00000391288 122 ntBASIC3.11□□□□□ -1.91
PEX1O43933 FTH1P15-201ENST00000406984 280 ntBASIC3.11□□□□□ -1.91
PEX1O43933 MTCYBP2-201ENST00000407745 171 ntBASIC3.11□□□□□ -1.91
PEX1O43933 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.11□□□□□ -1.91
PEX1O43933 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
PEX1O43933 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.11□□□□□ -1.91
PEX1O43933 RPL23AP75-201ENST00000491601 451 ntBASIC3.11□□□□□ -1.91
PEX1O43933 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.11□□□□□ -1.91
PEX1O43933 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.11□□□□□ -1.91
PEX1O43933 AP003733.2-201ENST00000529409 171 ntBASIC3.11□□□□□ -1.91
PEX1O43933 MIR3200-201ENST00000580767 85 ntBASIC3.11□□□□□ -1.91
PEX1O43933 AL451007.1-201ENST00000595491 289 ntBASIC3.11□□□□□ -1.91
PEX1O43933 RPL23AP78-201ENST00000599928 470 ntBASIC3.11□□□□□ -1.91
PEX1O43933 MIR3651-201ENST00000630427 90 ntBASIC3.11□□□□□ -1.91
PEX1O43933 U6.92-201ENST00000636464 89 ntBASIC3.11□□□□□ -1.91
PEX1O43933 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.11□□□□□ -1.91
PEX1O43933 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
PEX1O43933 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PEX1O43933 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PEX1O43933 Z83843.1-201ENST00000604070 3685 ntBASIC3.11□□□□□ -1.91
PEX1O43933 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.1□□□□□ -1.91
PEX1O43933 OR56A5-201ENST00000340110 738 ntBASIC3.1□□□□□ -1.91
PEX1O43933 RNU6-222P-201ENST00000362438 107 ntBASIC3.1□□□□□ -1.91
PEX1O43933 Y_RNA.27-201ENST00000362540 103 ntBASIC3.1□□□□□ -1.91
PEX1O43933 RNU1-76P-201ENST00000362903 159 ntBASIC3.1□□□□□ -1.91
PEX1O43933 Y_RNA.257-201ENST00000364596 102 ntBASIC3.1□□□□□ -1.91
PEX1O43933 SNORD32A-201ENST00000364805 84 ntBASIC3.1□□□□□ -1.91
PEX1O43933 U8.9-201ENST00000365667 134 ntBASIC3.1□□□□□ -1.91
PEX1O43933 RNU6-847P-201ENST00000411115 108 ntBASIC3.1□□□□□ -1.91
PEX1O43933 RPL37P4-201ENST00000448908 268 ntBASIC3.1□□□□□ -1.91
PEX1O43933 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.1□□□□□ -1.91
PEX1O43933 RNA5SP310-201ENST00000459084 116 ntBASIC3.1□□□□□ -1.91
PEX1O43933 AC025465.3-201ENST00000510570 311 ntBASIC3.1□□□□□ -1.91
PEX1O43933 AC067942.3-201ENST00000512025 362 ntBASIC3.1□□□□□ -1.91
PEX1O43933 RNU7-175P-201ENST00000515915 61 ntBASIC3.1□□□□□ -1.91
PEX1O43933 RNU6-581P-201ENST00000516214 105 ntBASIC3.1□□□□□ -1.91
PEX1O43933 SNORA74D-201ENST00000516404 141 ntBASIC3.1□□□□□ -1.91
PEX1O43933 Y_RNA.706-201ENST00000516933 99 ntBASIC3.1□□□□□ -1.91
PEX1O43933 AL442163.3-201ENST00000554110 156 ntBASIC3.1□□□□□ -1.91
PEX1O43933 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.1□□□□□ -1.91
PEX1O43933 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.1□□□□□ -1.91
PEX1O43933 MIR3128-201ENST00000581957 66 ntBASIC3.1□□□□□ -1.91
PEX1O43933 MIR4276-201ENST00000584832 70 ntBASIC3.1□□□□□ -1.91
PEX1O43933 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.1□□□□□ -1.91
PEX1O43933 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.1□□□□□ -1.91
PEX1O43933 uc_338.1-201ENST00000612113 180 ntBASIC3.1□□□□□ -1.91
PEX1O43933 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.1□□□□□ -1.91
PEX1O43933 AC233981.2-201ENST00000611524 1614 ntBASIC3.1□□□□□ -1.91
PEX1O43933 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PEX1O43933 AC022336.2-201ENST00000568966 2538 ntBASIC3.1□□□□□ -1.91
PEX1O43933 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PEX1O43933 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PEX1O43933 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.91
PEX1O43933 Y_RNA.14-201ENST00000362415 103 ntBASIC3.09□□□□□ -1.91
PEX1O43933 Y_RNA.60-201ENST00000362831 98 ntBASIC3.09□□□□□ -1.91
PEX1O43933 SNORD56.1-201ENST00000362913 68 ntBASIC3.09□□□□□ -1.91
PEX1O43933 Y_RNA.183-201ENST00000363882 113 ntBASIC3.09□□□□□ -1.91
PEX1O43933 Y_RNA.350-201ENST00000365409 98 ntBASIC3.09□□□□□ -1.91
PEX1O43933 Y_RNA.477-201ENST00000384352 108 ntBASIC3.09□□□□□ -1.91
PEX1O43933 MIR215-201ENST00000384858 110 ntBASIC3.09□□□□□ -1.91
PEX1O43933 AL591034.1-201ENST00000407447 340 ntBASIC3.09□□□□□ -1.91
PEX1O43933 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX1O43933 AL591043.1-201ENST00000432461 424 ntBASIC3.09□□□□□ -1.91
PEX1O43933 AC007969.2-201ENST00000441891 191 ntBASIC3.09□□□□□ -1.91
PEX1O43933 snoU13.30-201ENST00000458951 104 ntBASIC3.09□□□□□ -1.91
PEX1O43933 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.09□□□□□ -1.91
PEX1O43933 AF186996.7-201ENST00000492781 209 ntBASIC3.09□□□□□ -1.91
PEX1O43933 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.09□□□□□ -1.91
PEX1O43933 AP002770.2-201ENST00000543613 532 ntBASIC3.09□□□□□ -1.91
PEX1O43933 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX1O43933 RPL23AP88-201ENST00000605759 454 ntBASIC3.09□□□□□ -1.91
PEX1O43933 AC096772.1-201ENST00000609146 564 ntBASIC3.09□□□□□ -1.91
PEX1O43933 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.09□□□□□ -1.91
PEX1O43933 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
PEX1O43933 SNORA43.4-201ENST00000629559 138 ntBASIC3.09□□□□□ -1.91
PEX1O43933 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PEX1O43933 AC090740.1-201ENST00000623193 2262 ntBASIC3.09□□□□□ -1.92
PEX1O43933 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms