Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU6-2-201ENST00000384627 107 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 RNU6-29P-201ENST00000384637 107 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 RNU6-9-201ENST00000384776 107 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 RNU6-33P-201ENST00000384793 107 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 MIR512-1-201ENST00000384913 84 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 MT-TW-201ENST00000387382 68 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SMAD6O43541 RNU6-1197P-201ENST00000391183 107 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 BMS1P22-201ENST00000414726 313 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 ELOCP20-201ENST00000422460 345 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.85□□□□□ -1.95
SMAD6O43541 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
SMAD6O43541 AC092573.2-201ENST00000434546 243 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 MTCO3P8-201ENST00000453691 755 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 AC093852.1-201ENST00000503587 266 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 AL359273.1-201ENST00000510918 627 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 RN7SKP40-201ENST00000517211 242 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.85□□□□□ -1.95
SMAD6O43541 AC084851.1-201ENST00000529105 249 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 AC023157.2-201ENST00000540596 141 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 HMGB1P14-201ENST00000557424 591 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.85□□□□□ -1.95
SMAD6O43541 AL109918.3-201ENST00000603072 338 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.85□□□□□ -1.95
SMAD6O43541 RNU6-6P-201ENST00000606623 107 ntBASIC2.85□□□□□ -1.95
SMAD6O43541 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.85□□□□□ -1.95
SMAD6O43541 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.85□□□□□ -1.95
SMAD6O43541 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SMAD6O43541 RPL9P7-201ENST00000330965 580 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 RNU1-105P-201ENST00000363470 161 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 Y_RNA.276-201ENST00000364732 109 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 RNU6-806P-201ENST00000365147 105 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 RNU6-198P-201ENST00000384258 104 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 Y_RNA.483-201ENST00000384380 101 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 Y_RNA.510-201ENST00000384511 114 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 AL096701.2-201ENST00000416920 238 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 PGBD4P6-201ENST00000421501 610 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.84□□□□□ -1.95
SMAD6O43541 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.84□□□□□ -1.95
SMAD6O43541 AL513043.1-201ENST00000439124 535 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.84□□□□□ -1.95
SMAD6O43541 RNU6-1132P-201ENST00000459214 107 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 RNU6-1037P-201ENST00000459571 107 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 RPL9P9-202ENST00000466501 579 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.84□□□□□ -1.95
SMAD6O43541 RNA5SP356-201ENST00000515972 94 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 RPPH1-2P-201ENST00000516688 293 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 AC004584.2-201ENST00000570407 410 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.84□□□□□ -1.95
SMAD6O43541 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.84□□□□□ -1.95
SMAD6O43541 MIR3921-201ENST00000577308 85 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 VN1R91P-201ENST00000594377 169 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 AC009314.1-201ENST00000603871 304 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.84□□□□□ -1.95
SMAD6O43541 SCARNA15.3-201ENST00000626315 122 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 SCARNA4.1-201ENST00000628597 123 ntBASIC2.84□□□□□ -1.95
SMAD6O43541 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
SMAD6O43541 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
SMAD6O43541 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.83□□□□□ -1.96
SMAD6O43541 AC010615.1-201ENST00000594254 1764 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 DEFB108F-201ENST00000344638 222 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 Y_RNA.64-201ENST00000362845 102 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 RNU6-827P-201ENST00000365553 106 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 Y_RNA.376-201ENST00000365638 108 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.83□□□□□ -1.96
SMAD6O43541 SNORA51.11-201ENST00000384442 131 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 Y_RNA.551-201ENST00000384661 102 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 MIR181A2-201ENST00000384863 110 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 MIR521-1-201ENST00000384902 87 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 MIR625-201ENST00000385047 85 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 RNA5SP354-201ENST00000391247 136 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 AL138827.1-201ENST00000402666 306 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 AL591034.2-201ENST00000402839 359 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 MIR1302-6-201ENST00000408466 90 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 SNORD56-201ENST00000413522 71 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.83□□□□□ -1.96
SMAD6O43541 MYL8P-204ENST00000431574 518 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 RPS29P6-201ENST00000438196 145 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 AC108938.1-201ENST00000451204 136 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.83□□□□□ -1.96
SMAD6O43541 SNORD127-201ENST00000458892 86 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 AP004217.1-201ENST00000480579 346 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 RPL30P5-201ENST00000494923 336 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 SNORA25.11-201ENST00000515935 105 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 RNU6-397P-201ENST00000516226 104 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.83□□□□□ -1.96
SMAD6O43541 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.83□□□□□ -1.96
SMAD6O43541 AC090517.1-201ENST00000569307 266 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMAD6O43541 AC090115.4-201ENST00000609970 188 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 AC004852.3-201ENST00000614131 326 ntBASIC2.83□□□□□ -1.96
SMAD6O43541 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.83□□□□□ -1.96
SMAD6O43541 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SMAD6O43541 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
SMAD6O43541 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SMAD6O43541 AC093908.1-201ENST00000623125 8092 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMAD6O43541 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SMAD6O43541 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms