Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 Y_RNA.524-201ENST00000384564 100 ntBASIC3□□□□□ -1.93
PHGDHO43175 Y_RNA.561-201ENST00000384694 100 ntBASIC3□□□□□ -1.93
PHGDHO43175 MIR32-201ENST00000384965 70 ntBASIC3□□□□□ -1.93
PHGDHO43175 CBX3P9-201ENST00000402326 552 ntBASIC3□□□□□ -1.93
PHGDHO43175 RNU6-1156P-201ENST00000410365 100 ntBASIC3□□□□□ -1.93
PHGDHO43175 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3□□□□□ -1.93
PHGDHO43175 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3□□□□□ -1.93
PHGDHO43175 AC012306.1-201ENST00000423267 114 ntBASIC3□□□□□ -1.93
PHGDHO43175 CEP57L1P1-201ENST00000430943 1201 ntBASIC3□□□□□ -1.93
PHGDHO43175 AC099799.1-201ENST00000439809 192 ntBASIC3□□□□□ -1.93
PHGDHO43175 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3□□□□□ -1.93
PHGDHO43175 snoU13.6-201ENST00000458785 104 ntBASIC3□□□□□ -1.93
PHGDHO43175 AP004217.1-201ENST00000480579 346 ntBASIC3□□□□□ -1.93
PHGDHO43175 AC090096.1-201ENST00000489168 390 ntBASIC3□□□□□ -1.93
PHGDHO43175 AC104581.2-201ENST00000572227 430 ntBASIC3□□□□□ -1.93
PHGDHO43175 AL670379.2-201ENST00000604983 252 ntBASIC3□□□□□ -1.93
PHGDHO43175 MIR1244-1-201ENST00000612829 85 ntBASIC3□□□□□ -1.93
PHGDHO43175 AC040896.1-201ENST00000613819 479 ntBASIC3□□□□□ -1.93
PHGDHO43175 MIR1244-3-201ENST00000635744 85 ntBASIC3□□□□□ -1.93
PHGDHO43175 MIR1244-2-201ENST00000636449 85 ntBASIC3□□□□□ -1.93
PHGDHO43175 MIR1244-4-202ENST00000636813 85 ntBASIC3□□□□□ -1.93
PHGDHO43175 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PHGDHO43175 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PHGDHO43175 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.99□□□□□ -1.93
PHGDHO43175 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.99□□□□□ -1.93
PHGDHO43175 SNORD46.1-201ENST00000364139 104 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 Y_RNA.252-201ENST00000364556 101 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PHGDHO43175 Y_RNA.496-201ENST00000384444 101 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AL138885.1-201ENST00000405921 675 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 MTCYBP2-201ENST00000407745 171 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PHGDHO43175 RPS15AP7-201ENST00000439294 405 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AL035666.1-201ENST00000446195 348 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 TOMM22P6-201ENST00000465035 409 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 Y_RNA.706-201ENST00000516933 99 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AL442663.2-201ENST00000554385 511 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.99□□□□□ -1.93
PHGDHO43175 MIR5680-201ENST00000577577 84 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AC105245.1-201ENST00000581934 244 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AC100812.1-201ENST00000607622 580 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AC069294.1-201ENST00000608397 350 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.99□□□□□ -1.93
PHGDHO43175 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.99□□□□□ -1.93
PHGDHO43175 MIR7112-201ENST00000616126 65 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AC137590.2-201ENST00000619709 240 ntBASIC2.99□□□□□ -1.93
PHGDHO43175 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PHGDHO43175 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PHGDHO43175 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PHGDHO43175 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PHGDHO43175 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.99□□□□□ -1.93
PHGDHO43175 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PHGDHO43175 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.99□□□□□ -1.93
PHGDHO43175 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.98□□□□□ -1.93
PHGDHO43175 AC138915.1-201ENST00000565427 1685 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PHGDHO43175 snoU2_19.1-201ENST00000362361 80 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 RNU6-1159P-201ENST00000362933 107 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 Y_RNA.314-201ENST00000365114 102 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 MIR625-201ENST00000385047 85 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 U6atac.2-201ENST00000408644 118 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 RN7SKP220-201ENST00000410611 288 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 AC018865.2-201ENST00000423631 129 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 AL160004.2-201ENST00000432935 350 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.98□□□□□ -1.93
PHGDHO43175 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.98□□□□□ -1.93
PHGDHO43175 AC023141.11-201ENST00000508864 202 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 AC074250.1-201ENST00000511117 192 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.98□□□□□ -1.93
PHGDHO43175 CBX3P7-201ENST00000532876 502 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 CYP4A27P-201ENST00000567218 190 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 MIR3923-201ENST00000579521 83 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 AL355802.3-201ENST00000607571 545 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 RMST_6.1-201ENST00000611980 203 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 AC090517.3-201ENST00000625170 141 ntBASIC2.98□□□□□ -1.93
PHGDHO43175 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.98□□□□□ -1.93
PHGDHO43175 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.98□□□□□ -1.93
PHGDHO43175 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.97□□□□□ -1.93
PHGDHO43175 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PHGDHO43175 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.97□□□□□ -1.93
PHGDHO43175 Y_RNA.28-201ENST00000362554 111 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 SNORD115-32-201ENST00000364079 82 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 MIR208B-201ENST00000401172 77 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 RNU4-47P-201ENST00000410876 114 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.97□□□□□ -1.93
PHGDHO43175 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.97□□□□□ -1.93
PHGDHO43175 AP000705.1-201ENST00000454567 350 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 AL353752.1-201ENST00000454946 260 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 RPS3P1-201ENST00000456781 192 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 RN7SL807P-201ENST00000470923 297 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 RPL23AP70-201ENST00000483361 460 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.97□□□□□ -1.93
PHGDHO43175 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.97□□□□□ -1.93
PHGDHO43175 RNU7-4P-201ENST00000516961 62 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 RN7SKP295-201ENST00000517264 153 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.97□□□□□ -1.93
PHGDHO43175 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.97□□□□□ -1.93
PHGDHO43175 AC006157.1-201ENST00000611750 366 ntBASIC2.97□□□□□ -1.93
PHGDHO43175 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms