Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RPS29P25-201ENST00000481709 171 ntBASIC2.31□□□□□ -2.04
O00370 AC018437.1-201ENST00000492214 406 ntBASIC2.31□□□□□ -2.04
O00370 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
O00370 AC107953.1-201ENST00000522216 297 ntBASIC2.31□□□□□ -2.04
O00370 AC118273.2-201ENST00000532092 465 ntBASIC2.31□□□□□ -2.04
O00370 MIR5002-201ENST00000584713 97 ntBASIC2.31□□□□□ -2.04
O00370 AC006504.8-201ENST00000621046 635 ntBASIC2.31□□□□□ -2.04
O00370 AC241585.2-209ENST00000638217 143 ntBASIC2.31□□□□□ -2.04
O00370 MTND4P1-201ENST00000457501 1466 ntBASIC2.31□□□□□ -2.04
O00370 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
O00370 OR56A5-201ENST00000340110 738 ntBASIC2.3□□□□□ -2.04
O00370 RNU6-254P-201ENST00000363377 107 ntBASIC2.3□□□□□ -2.04
O00370 Y_RNA.160-201ENST00000363677 92 ntBASIC2.3□□□□□ -2.04
O00370 RNU6-622P-201ENST00000384272 103 ntBASIC2.3□□□□□ -2.04
O00370 RNU6-1148P-201ENST00000410992 104 ntBASIC2.3□□□□□ -2.04
O00370 VN1R36P-201ENST00000414936 291 ntBASIC2.3□□□□□ -2.04
O00370 AL513185.2-201ENST00000425543 193 ntBASIC2.3□□□□□ -2.04
O00370 RPL39P29-201ENST00000447779 157 ntBASIC2.3□□□□□ -2.04
O00370 AL513124.1-201ENST00000450410 614 ntBASIC2.3□□□□□ -2.04
O00370 FGF7P6-202ENST00000451282 293 ntBASIC2.3□□□□□ -2.04
O00370 AMD1P1-201ENST00000457220 922 ntBASIC2.3□□□□□ -2.04
O00370 TRBVA-201ENST00000498804 316 ntBASIC2.3□□□□□ -2.04
O00370 FAM206BP-201ENST00000510179 541 ntBASIC2.3□□□□□ -2.04
O00370 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.3□□□□□ -2.04
O00370 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.3□□□□□ -2.04
O00370 AF235103.2-201ENST00000525753 346 ntBASIC2.3□□□□□ -2.04
O00370 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.3□□□□□ -2.04
O00370 AC026371.1-201ENST00000551867 419 ntBASIC2.3□□□□□ -2.04
O00370 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.3□□□□□ -2.04
O00370 MIR3942-201ENST00000585264 109 ntBASIC2.3□□□□□ -2.04
O00370 AL670379.2-201ENST00000604983 252 ntBASIC2.3□□□□□ -2.04
O00370 MIR5739-201ENST00000619803 80 ntBASIC2.3□□□□□ -2.04
O00370 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
O00370 HAUS6P2-201ENST00000433254 2404 ntBASIC2.29□□□□□ -2.04
O00370 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.29□□□□□ -2.04
O00370 RNU6-1329P-201ENST00000365664 107 ntBASIC2.29□□□□□ -2.04
O00370 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
O00370 RNU6-1032P-201ENST00000384100 107 ntBASIC2.29□□□□□ -2.04
O00370 RNU6-933P-201ENST00000384424 107 ntBASIC2.29□□□□□ -2.04
O00370 RNU1-148P-201ENST00000384472 162 ntBASIC2.29□□□□□ -2.04
O00370 RNU1-57P-201ENST00000384491 166 ntBASIC2.29□□□□□ -2.04
O00370 MIR186-201ENST00000384988 86 ntBASIC2.29□□□□□ -2.04
O00370 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
O00370 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
O00370 AL135786.1-201ENST00000415892 214 ntBASIC2.29□□□□□ -2.04
O00370 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.29□□□□□ -2.04
O00370 AL590632.1-201ENST00000424289 371 ntBASIC2.29□□□□□ -2.04
O00370 Z82205.1-201ENST00000428456 297 ntBASIC2.29□□□□□ -2.04
O00370 MTND3P9-201ENST00000429526 346 ntBASIC2.29□□□□□ -2.04
O00370 AC243964.1-201ENST00000441814 261 ntBASIC2.29□□□□□ -2.04
O00370 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.29□□□□□ -2.04
O00370 RNU7-66P-201ENST00000459469 62 ntBASIC2.29□□□□□ -2.04
O00370 AC092436.3-201ENST00000511788 257 ntBASIC2.29□□□□□ -2.04
O00370 RNU4-49P-201ENST00000516080 140 ntBASIC2.29□□□□□ -2.04
O00370 RNU6-358P-201ENST00000516564 75 ntBASIC2.29□□□□□ -2.04
O00370 RNU6-256P-201ENST00000516747 97 ntBASIC2.29□□□□□ -2.04
O00370 AC079598.5-201ENST00000547460 117 ntBASIC2.29□□□□□ -2.04
O00370 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
O00370 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
O00370 MIR3126-201ENST00000577443 74 ntBASIC2.29□□□□□ -2.04
O00370 RNU6-91P-201ENST00000607774 107 ntBASIC2.29□□□□□ -2.04
O00370 uc_338.15-201ENST00000615470 191 ntBASIC2.29□□□□□ -2.04
O00370 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.29□□□□□ -2.04
O00370 U8.2-201ENST00000363156 134 ntBASIC2.28□□□□□ -2.04
O00370 RNU6-1317P-201ENST00000364582 104 ntBASIC2.28□□□□□ -2.04
O00370 RNU6-487P-201ENST00000365430 104 ntBASIC2.28□□□□□ -2.04
O00370 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.28□□□□□ -2.04
O00370 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.28□□□□□ -2.04
O00370 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.28□□□□□ -2.04
O00370 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.28□□□□□ -2.04
O00370 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.28□□□□□ -2.04
O00370 AL121890.1-201ENST00000435457 205 ntBASIC2.28□□□□□ -2.04
O00370 MTND4LP16-201ENST00000440828 295 ntBASIC2.28□□□□□ -2.04
O00370 AC007969.2-201ENST00000441891 191 ntBASIC2.28□□□□□ -2.04
O00370 USP9YP8-201ENST00000441913 500 ntBASIC2.28□□□□□ -2.04
O00370 RNU6-717P-201ENST00000459076 104 ntBASIC2.28□□□□□ -2.04
O00370 RPL31P58-201ENST00000469001 379 ntBASIC2.28□□□□□ -2.04
O00370 YWHAEP4-201ENST00000505390 198 ntBASIC2.28□□□□□ -2.04
O00370 RNU2-53P-201ENST00000516257 147 ntBASIC2.28□□□□□ -2.04
O00370 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.28□□□□□ -2.04
O00370 PSMA3P-201ENST00000555485 635 ntBASIC2.28□□□□□ -2.04
O00370 AC018638.8-201ENST00000588755 281 ntBASIC2.28□□□□□ -2.04
O00370 AC011712.1-201ENST00000588959 234 ntBASIC2.28□□□□□ -2.04
O00370 RPL30P11-203ENST00000598995 310 ntBASIC2.28□□□□□ -2.04
O00370 U4atac.1-201ENST00000618345 95 ntBASIC2.28□□□□□ -2.04
O00370 AC009248.2-201ENST00000619826 254 ntBASIC2.28□□□□□ -2.04
O00370 AC007792.1-201ENST00000623023 402 ntBASIC2.28□□□□□ -2.04
O00370 AL596028.1-201ENST00000326971 197 ntBASIC2.27□□□□□ -2.05
O00370 Y_RNA.40-201ENST00000362645 93 ntBASIC2.27□□□□□ -2.05
O00370 RNU6-529P-201ENST00000363383 104 ntBASIC2.27□□□□□ -2.05
O00370 RNU6-790P-201ENST00000384479 105 ntBASIC2.27□□□□□ -2.05
O00370 RNU6-831P-201ENST00000384548 107 ntBASIC2.27□□□□□ -2.05
O00370 MIR521-1-201ENST00000384902 87 ntBASIC2.27□□□□□ -2.05
O00370 AL355497.1-201ENST00000406262 551 ntBASIC2.27□□□□□ -2.05
O00370 RNA5SP425-201ENST00000410336 112 ntBASIC2.27□□□□□ -2.05
O00370 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.27□□□□□ -2.05
O00370 USP9YP28-201ENST00000435142 589 ntBASIC2.27□□□□□ -2.05
O00370 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.27□□□□□ -2.05
O00370 PPP1R2P5-201ENST00000457256 603 ntBASIC2.27□□□□□ -2.05
O00370 CYP2C59P-201ENST00000457790 269 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms