Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SRP72P2-201ENST00000344851 1979 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 Y_RNA.218-201ENST00000364218 104 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 RNU6-153P-201ENST00000364422 104 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 Y_RNA.331-201ENST00000365267 102 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 MIR153-1-201ENST00000384914 90 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 AL035461.1-201ENST00000421490 332 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 AC007919.1-201ENST00000429380 217 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 WARS2P1-201ENST00000429678 537 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 SEPT7P4-201ENST00000437076 306 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 POLR2KP2-201ENST00000438155 177 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.66□□□□□ -1.82
RFXAPO00287 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.66□□□□□ -1.82
RFXAPO00287 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.66□□□□□ -1.82
RFXAPO00287 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.66□□□□□ -1.82
RFXAPO00287 AC007390.2-201ENST00000606229 3803 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 U73479.1-201ENST00000618062 168 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 AC092628.2-201ENST00000622492 339 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 AP003355.3-201ENST00000623465 114 ntBASIC3.66□□□□□ -1.82
RFXAPO00287 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.66□□□□□ -1.82
RFXAPO00287 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.66□□□□□ -1.82
RFXAPO00287 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.66□□□□□ -1.82
RFXAPO00287 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFXAPO00287 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFXAPO00287 AL450326.2-201ENST00000421913 1962 ntBASIC3.65□□□□□ -1.82
RFXAPO00287 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFXAPO00287 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.65□□□□□ -1.82
RFXAPO00287 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RFXAPO00287 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
RFXAPO00287 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RFXAPO00287 RNU4-80P-201ENST00000363200 141 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 Y_RNA.262-201ENST00000364641 102 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 RNA5SP205-201ENST00000364653 136 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 RNU6-211P-201ENST00000384047 107 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 RNU2-2P-201ENST00000410396 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.65□□□□□ -1.83
RFXAPO00287 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.65□□□□□ -1.83
RFXAPO00287 RN7SKP49-201ENST00000516675 260 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 SUMO2P18-201ENST00000518873 252 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.65□□□□□ -1.83
RFXAPO00287 AL391261.3-201ENST00000557194 520 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 RNU2-4P-201ENST00000606190 192 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 AL008718.3-201ENST00000610217 321 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 AC013412.1-201ENST00000610687 192 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.15-201ENST00000611544 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 RMST_6.1-201ENST00000611980 203 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.16-201ENST00000613119 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.12-201ENST00000613778 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.9-201ENST00000615427 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.11-201ENST00000616345 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.2-201ENST00000616535 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.3-201ENST00000617785 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.19-201ENST00000618602 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 RNU2-1-201ENST00000618664 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.6-201ENST00000619225 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.5-201ENST00000619465 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 U2.10-201ENST00000620268 191 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 snoU18.1-201ENST00000629629 71 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.83
RFXAPO00287 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFXAPO00287 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.65□□□□□ -1.83
RFXAPO00287 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.65□□□□□ -1.83
RFXAPO00287 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RFXAPO00287 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFXAPO00287 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RFXAPO00287 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFXAPO00287 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFXAPO00287 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RFXAPO00287 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.64□□□□□ -1.83
RFXAPO00287 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.64□□□□□ -1.83
RFXAPO00287 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RFXAPO00287 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RFXAPO00287 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
RFXAPO00287 MIR423-201ENST00000362201 94 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 Y_RNA.245-201ENST00000364493 95 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.64□□□□□ -1.83
RFXAPO00287 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFXAPO00287 U8.10-201ENST00000384260 133 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 RNU6-72P-201ENST00000384285 79 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 MIR329-1-201ENST00000385028 80 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 SNORA46.1-201ENST00000391069 153 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 HLFP1-201ENST00000402375 499 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 RPS15AP5-201ENST00000436276 388 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 AL078601.1-201ENST00000444542 271 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.64□□□□□ -1.83
RFXAPO00287 RPS4XP22-201ENST00000480755 780 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 FCF1P8-201ENST00000510322 597 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 SNORA40.9-201ENST00000515895 93 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 RNU6-971P-201ENST00000516920 106 ntBASIC3.64□□□□□ -1.83
RFXAPO00287 RNA5SP290-201ENST00000517133 127 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms