Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPL21P1-201ENST00000399532 476 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AL079342.2-201ENST00000403367 482 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 RNA5SP504-201ENST00000410676 117 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AP000275.1-201ENST00000411943 390 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC027644.1-201ENST00000419595 298 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 FO393414.1-201ENST00000428697 1184 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 MTND4P25-201ENST00000441039 533 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 RPL39P39-201ENST00000455840 151 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AL583843.1-201ENST00000456070 346 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC119751.5-201ENST00000514077 770 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 MTND4LP26-201ENST00000518144 282 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC069113.3-201ENST00000521019 150 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC016256.1-201ENST00000547971 354 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AL353778.1-201ENST00000603149 408 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC005229.3-201ENST00000603438 323 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 AC136475.10-201ENST00000620253 385 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 Y_RNA.111-201ENST00000363248 100 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 RNA5SP214-201ENST00000363378 118 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 RNA5SP99-201ENST00000364020 114 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 SNORD31B-201ENST00000364977 69 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 SNORA4.3-201ENST00000365564 137 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR936-201ENST00000401264 98 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU2-70P-201ENST00000410718 179 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC007395.1-201ENST00000451333 677 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC245047.8-201ENST00000456455 284 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 MTCO3P42-201ENST00000509488 518 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 MTCO3P39-201ENST00000514812 518 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC023632.1-201ENST00000518463 375 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC027419.1-201ENST00000522976 328 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR1273C-201ENST00000578669 77 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR4514-201ENST00000581410 57 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR151B-201ENST00000584249 96 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR4293-201ENST00000584305 78 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC131055.1-201ENST00000584626 316 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC136443.5-201ENST00000603741 370 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 AC106754.2-201ENST00000623006 233 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.24□□□□□ -2.45
CHKB-CPT1BH3BT56 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 MRPS36P1-201ENST00000421291 307 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 MTCYBP10-201ENST00000424905 650 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 snoU109.2-201ENST00000459316 135 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU1-86P-201ENST00000516108 154 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU1-107P-201ENST00000516617 154 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 MTND1P36-201ENST00000522384 936 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 SUB1P2-201ENST00000556401 297 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AC022523.2-201ENST00000561045 150 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AL390123.1-201ENST00000603216 237 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR6788-201ENST00000618842 66 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 AC078938.1-201ENST00000620993 318 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR338-201ENST00000636369 67 ntBASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CHKB-CPT1BH3BT56 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU4-48P-201ENST00000365559 182 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR548J-201ENST00000408833 112 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 RNA5SP247-201ENST00000411181 105 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AL121890.1-201ENST00000435457 205 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AC104332.1-201ENST00000440471 797 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 MTND1P31-201ENST00000449206 961 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 MRPL42P4-201ENST00000453267 443 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AC104563.1-201ENST00000476147 376 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AC108729.3-201ENST00000513484 108 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AC090049.2-201ENST00000550377 109 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AF131215.7-201ENST00000602443 707 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AL136317.1-201ENST00000612653 226 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AC005332.6-201ENST00000613178 446 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 AP000676.3-201ENST00000623299 569 ntBASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CHKB-CPT1BH3BT56 RNY1P10-201ENST00000363268 113 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU4-76P-201ENST00000364509 141 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-395P-201ENST00000365662 106 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-815P-201ENST00000384080 113 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR32-201ENST00000384965 70 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 RNA5SP496-201ENST00000391240 109 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms