Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC007919.1-201ENST00000429380 217 ntBASIC4.38□□□□□ -1.71
H3BM21 AC007224.1-201ENST00000564410 144 ntBASIC4.38□□□□□ -1.71
H3BM21 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
H3BM21 AC020895.1-201ENST00000595362 272 ntBASIC4.38□□□□□ -1.71
H3BM21 AL356575.1-201ENST00000603008 283 ntBASIC4.38□□□□□ -1.71
H3BM21 AL137843.1-201ENST00000605078 385 ntBASIC4.38□□□□□ -1.71
H3BM21 AC019159.1-201ENST00000605094 187 ntBASIC4.38□□□□□ -1.71
H3BM21 AC140479.6-201ENST00000633535 357 ntBASIC4.38□□□□□ -1.71
H3BM21 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
H3BM21 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
H3BM21 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.37□□□□□ -1.71
H3BM21 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.37□□□□□ -1.71
H3BM21 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.37□□□□□ -1.71
H3BM21 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3BM21 AL356489.2-201ENST00000566968 3528 ntBASIC4.37□□□□□ -1.71
H3BM21 FAM91A3P-201ENST00000456826 2544 ntBASIC4.37□□□□□ -1.71
H3BM21 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3BM21 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3BM21 Y_RNA.52-201ENST00000362760 96 ntBASIC4.37□□□□□ -1.71
H3BM21 RNU6-484P-201ENST00000384016 107 ntBASIC4.37□□□□□ -1.71
H3BM21 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.37□□□□□ -1.71
H3BM21 RPL23AP62-201ENST00000463396 453 ntBASIC4.37□□□□□ -1.71
H3BM21 RN7SL41P-201ENST00000476144 297 ntBASIC4.37□□□□□ -1.71
H3BM21 AC105137.1-201ENST00000484355 562 ntBASIC4.37□□□□□ -1.71
H3BM21 AC117454.1-201ENST00000491120 168 ntBASIC4.37□□□□□ -1.71
H3BM21 RN7SL812P-201ENST00000493791 279 ntBASIC4.37□□□□□ -1.71
H3BM21 RNA5SP367-201ENST00000516557 118 ntBASIC4.37□□□□□ -1.71
H3BM21 AL160236.1-201ENST00000556317 195 ntBASIC4.37□□□□□ -1.71
H3BM21 MIR3160-1-201ENST00000577972 85 ntBASIC4.37□□□□□ -1.71
H3BM21 SNRPGP20-201ENST00000604477 205 ntBASIC4.37□□□□□ -1.71
H3BM21 AC140113.4-201ENST00000622087 222 ntBASIC4.37□□□□□ -1.71
H3BM21 MIR3653-201ENST00000625572 110 ntBASIC4.37□□□□□ -1.71
H3BM21 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3BM21 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H3BM21 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3BM21 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.37□□□□□ -1.71
H3BM21 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3BM21 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3BM21 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H3BM21 Y_RNA.107-201ENST00000363190 121 ntBASIC4.36□□□□□ -1.71
H3BM21 RNA5SP28-201ENST00000363841 119 ntBASIC4.36□□□□□ -1.71
H3BM21 RNU6-1276P-201ENST00000365372 104 ntBASIC4.36□□□□□ -1.71
H3BM21 RNA5SP151-201ENST00000365632 117 ntBASIC4.36□□□□□ -1.71
H3BM21 RNU6-242P-201ENST00000384359 107 ntBASIC4.36□□□□□ -1.71
H3BM21 MIR3065-201ENST00000390137 79 ntBASIC4.36□□□□□ -1.71
H3BM21 SNORA57.1-201ENST00000391227 145 ntBASIC4.36□□□□□ -1.71
H3BM21 RNA5SP136-201ENST00000410906 107 ntBASIC4.36□□□□□ -1.71
H3BM21 RNU2-55P-201ENST00000411146 174 ntBASIC4.36□□□□□ -1.71
H3BM21 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.36□□□□□ -1.71
H3BM21 AC078809.1-201ENST00000427601 140 ntBASIC4.36□□□□□ -1.71
H3BM21 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.36□□□□□ -1.71
H3BM21 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H3BM21 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H3BM21 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.36□□□□□ -1.71
H3BM21 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
H3BM21 AC091167.1-201ENST00000492017 396 ntBASIC4.36□□□□□ -1.71
H3BM21 RNA5SP154-201ENST00000516193 111 ntBASIC4.36□□□□□ -1.71
H3BM21 SCARNA15.2-201ENST00000516409 127 ntBASIC4.36□□□□□ -1.71
H3BM21 RNU6-1256P-201ENST00000516539 103 ntBASIC4.36□□□□□ -1.71
H3BM21 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.36□□□□□ -1.71
H3BM21 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
H3BM21 CYCSP39-201ENST00000565821 309 ntBASIC4.36□□□□□ -1.71
H3BM21 AC025754.2-201ENST00000606491 432 ntBASIC4.36□□□□□ -1.71
H3BM21 AC099778.2-201ENST00000610904 211 ntBASIC4.36□□□□□ -1.71
H3BM21 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H3BM21 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
H3BM21 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
H3BM21 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.36□□□□□ -1.71
H3BM21 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3BM21 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
H3BM21 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3BM21 Z73965.1-201ENST00000623412 2297 ntBASIC4.35□□□□□ -1.71
H3BM21 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.35□□□□□ -1.71
H3BM21 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
H3BM21 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3BM21 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
H3BM21 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H3BM21 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
H3BM21 MIR383-201ENST00000362257 73 ntBASIC4.35□□□□□ -1.71
H3BM21 RNY1P1-201ENST00000364372 112 ntBASIC4.35□□□□□ -1.71
H3BM21 RNU6-497P-201ENST00000365316 104 ntBASIC4.35□□□□□ -1.71
H3BM21 MIR320B2-201ENST00000408479 138 ntBASIC4.35□□□□□ -1.71
H3BM21 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.35□□□□□ -1.71
H3BM21 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.35□□□□□ -1.71
H3BM21 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.35□□□□□ -1.71
H3BM21 RNU7-115P-201ENST00000516433 55 ntBASIC4.35□□□□□ -1.71
H3BM21 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
H3BM21 AC011471.1-201ENST00000585766 187 ntBASIC4.35□□□□□ -1.71
H3BM21 ZYXP1-201ENST00000617638 118 ntBASIC4.35□□□□□ -1.71
H3BM21 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
H3BM21 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3BM21 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
H3BM21 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
H3BM21 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.34□□□□□ -1.71
H3BM21 RNA5SP502-201ENST00000362694 119 ntBASIC4.34□□□□□ -1.71
H3BM21 RNU6-1279P-201ENST00000383917 103 ntBASIC4.34□□□□□ -1.71
H3BM21 RNU1-44P-201ENST00000384453 163 ntBASIC4.34□□□□□ -1.71
H3BM21 SNORA26.3-201ENST00000391119 136 ntBASIC4.34□□□□□ -1.71
H3BM21 SNORA11F-201ENST00000408237 128 ntBASIC4.34□□□□□ -1.71
H3BM21 RNA5SP146-201ENST00000410743 123 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms