Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RPS3AP23-202ENST00000574601 686 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RPL30P11-203ENST00000598995 310 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 FAM157A-202ENST00000615155 405 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC027124.2-201ENST00000428249 105 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 MTCO2P3-201ENST00000442543 421 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC092989.1-201ENST00000481235 277 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AF213884.2-201ENST00000510417 903 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-718P-201ENST00000516166 105 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-323P-201ENST00000521915 107 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 CBX3P7-201ENST00000532876 502 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 PSMA3P-201ENST00000555485 635 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC015712.3-201ENST00000559380 164 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC009314.1-201ENST00000603871 304 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AL138963.2-201ENST00000605137 226 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 CTHRC1P1-201ENST00000605383 469 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AL357078.3-201ENST00000607528 618 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC064836.2-201ENST00000609491 462 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC007792.1-201ENST00000623023 402 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 AC002543.1-201ENST00000299783 1954 ntBASIC2.07□□□□□ -2.08
NEDD8-MDP1E9PL57 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-254P-201ENST00000363377 107 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 SNORD32A-201ENST00000364805 84 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 Y_RNA.295-201ENST00000364918 102 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 Y_RNA.373-201ENST00000365600 103 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 Y_RNA.453-201ENST00000384223 109 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-1222P-201ENST00000384615 107 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 CBX3P9-201ENST00000402326 552 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC019129.1-201ENST00000403786 261 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 EIF1P1-201ENST00000421436 341 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 SNAP23P1-201ENST00000433229 246 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU7-66P-201ENST00000459469 62 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AK3P2-201ENST00000507976 429 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 SNORA19.2-201ENST00000516013 114 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-295P-201ENST00000516901 104 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AP003033.1-201ENST00000527244 415 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC146944.4-201ENST00000602697 718 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC122108.2-201ENST00000611946 526 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC007014.2-201ENST00000615581 479 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 MIR5739-201ENST00000619803 80 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 AC027514.1-201ENST00000588561 1603 ntBASIC2.06□□□□□ -2.08
NEDD8-MDP1E9PL57 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-1210P-201ENST00000363775 107 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-1329P-201ENST00000365664 107 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-1032P-201ENST00000384100 107 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 Y_RNA.619-201ENST00000410951 90 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AL353752.1-201ENST00000454946 260 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 RPL30P1-201ENST00000488676 339 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 MTCYBP18-201ENST00000501056 747 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 FAM206BP-201ENST00000510179 541 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AC092436.3-201ENST00000511788 257 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AC025423.5-201ENST00000550230 219 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AL133241.1-201ENST00000556832 487 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AC093249.1-201ENST00000567049 203 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 MIR5002-201ENST00000584713 97 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AP003465.2-201ENST00000602571 373 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AC107304.1-201ENST00000604229 296 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AL449363.1-201ENST00000617815 186 ntBASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.05□□□□□ -2.08
NEDD8-MDP1E9PL57 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-212P-201ENST00000362642 104 ntBASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-655P-201ENST00000362858 107 ntBASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-877P-201ENST00000383868 107 ntBASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU4-52P-201ENST00000384209 138 ntBASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-43P-201ENST00000384302 107 ntBASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 U3.40-201ENST00000408706 208 ntBASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-1148P-201ENST00000410992 104 ntBASIC2.04□□□□□ -2.08
NEDD8-MDP1E9PL57 HMGB3P2-201ENST00000411913 584 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms