Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 U6.42-201ENST00000618440 107 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 MIR3199-2-201ENST00000636243 86 ntBASIC1.83□□□□□ -2.12
TRIM49D1C9J1S8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 SNORD56.1-201ENST00000362913 68 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 Y_RNA.160-201ENST00000363677 92 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 MIR218-1-201ENST00000384999 110 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 MT-TL1-201ENST00000386347 75 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-876P-201ENST00000391295 104 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 PDCL2P1-201ENST00000419302 352 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 SNRPEP10-201ENST00000420249 274 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AC010095.1-201ENST00000443543 144 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 OSTCP8-201ENST00000445117 448 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 PPP1R2P5-201ENST00000457256 603 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 RNU7-187P-201ENST00000458985 68 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 MED28P2-201ENST00000475771 317 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 MTCYBP40-201ENST00000509390 1135 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 SMURF2P1-201ENST00000514992 481 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 AC009248.2-201ENST00000619826 254 ntBASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
TRIM49D1C9J1S8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-254P-201ENST00000363377 107 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-306P-201ENST00000384617 107 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 AL079342.1-201ENST00000401460 267 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 RNU4-26P-201ENST00000410270 107 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 GPM6BP3-201ENST00000442797 145 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 AMD1P1-201ENST00000457220 922 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 snoU13.15-201ENST00000459407 104 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 AC112771.1-201ENST00000463581 102 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 RPL30P12-201ENST00000474666 353 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 MIR5571-201ENST00000577998 113 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 MIR4801-201ENST00000582704 82 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 AC087045.1-201ENST00000605856 382 ntBASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM49D1C9J1S8 RNU5E-7P-201ENST00000365290 117 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-1083P-201ENST00000384022 107 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-1032P-201ENST00000384100 107 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 MIR450B-201ENST00000401182 78 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-1304P-201ENST00000411374 106 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 PTGES3P4-201ENST00000426243 356 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 AL365400.1-201ENST00000431854 640 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 MICF-203ENST00000432679 129 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 HMGB1P30-201ENST00000492455 606 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 LRRC34P2-201ENST00000514850 553 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 CYCSP26-201ENST00000534107 320 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 TRAV32-201ENST00000553993 340 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 uc_338.11-201ENST00000619132 160 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 U4.7-201ENST00000638126 106 ntBASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TRIM49D1C9J1S8 AC121333.1-201ENST00000567488 2709 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-529P-201ENST00000363383 104 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-1059P-201ENST00000363752 98 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-105P-201ENST00000363909 104 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 Y_RNA.212-201ENST00000364177 102 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 SNORA16B-201ENST00000364674 135 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 Y_RNA.414-201ENST00000384011 101 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 SNORA36A-201ENST00000384221 132 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-19P-201ENST00000384718 107 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 RNU4-14P-201ENST00000410858 122 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 BX276092.3-201ENST00000424182 230 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms