Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 uc_338.28-201ENST00000612082 187 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 SNORD114-12-201ENST00000365400 75 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 MIR145-201ENST00000384967 88 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 SSR1P2-201ENST00000415208 787 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 C1DP2-201ENST00000418167 426 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A5A8TX70 C1DP4-201ENST00000455429 424 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 RNU7-159P-201ENST00000459284 62 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AC011005.2-201ENST00000487324 359 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 HMGB1P30-201ENST00000492455 606 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A5A8TX70 RNU6-706P-201ENST00000517229 104 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 SUMO2P16-201ENST00000519475 264 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AC138207.3-201ENST00000585289 166 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AP000860.1-201ENST00000605250 559 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AC079791.1-201ENST00000605356 973 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 AC013476.2-201ENST00000614456 459 ntBASIC-0.34□□□□□ -2.46
COL6A5A8TX70 SNORD14D-201ENST00000384390 87 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 SNORA26.3-201ENST00000391119 136 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 RNA5SP56-201ENST00000410277 118 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 MED13P1-201ENST00000428342 171 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 SMURF2P1-201ENST00000514992 481 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC005261.5-201ENST00000596280 355 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AL031176.1-201ENST00000604554 466 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AL360219.1-201ENST00000610230 366 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AP000676.3-201ENST00000623299 569 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AL603839.4-201ENST00000624658 1005 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 LINC02555-201ENST00000563933 1951 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 RNU6-540P-201ENST00000384622 101 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 MIR597-201ENST00000384968 97 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 RNU6-821P-201ENST00000390995 107 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 RNU6-863P-201ENST00000515989 104 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC024581.2-201ENST00000619986 252 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 AC084824.4-201ENST00000620106 731 ntBASIC-0.35□□□□□ -2.47
COL6A5A8TX70 RNU5E-1-201ENST00000362477 120 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MIR610-201ENST00000385139 96 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
COL6A5A8TX70 TAAR7P-201ENST00000436141 242 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 STAG3L5P-204ENST00000443759 179 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL6A5A8TX70 RNF138P1-201ENST00000502765 546 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 RPF2P2-201ENST00000504693 896 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC025423.5-201ENST00000550230 219 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC011921.3-201ENST00000605540 361 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MIR412-201ENST00000362142 91 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MT-TM-201ENST00000387377 68 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 RNU6-747P-201ENST00000390928 104 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 RNU6-241P-201ENST00000391148 104 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 RNA5SP482-201ENST00000391269 118 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AL606923.1-201ENST00000406616 190 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MTCYBP29-201ENST00000436327 1006 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC002381.1-201ENST00000447049 280 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AL031313.1-201ENST00000448435 256 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC113410.1-201ENST00000505029 247 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC116562.3-201ENST00000506136 177 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MTCO3P9-201ENST00000506989 781 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 MTCO3P7-201ENST00000510008 774 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC104057.1-201ENST00000515547 497 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 SNORA27.4-201ENST00000516650 95 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 SNORD19.2-201ENST00000516978 73 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC124293.1-201ENST00000530034 493 ntBASIC-0.36□□□□□ -2.47
COL6A5A8TX70 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.36□□□□□ -2.47
COL6A5A8TX70 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.36□□□□□ -2.47
COL6A5A8TX70 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 RNU6-116P-201ENST00000384042 109 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 MIR593-201ENST00000384856 100 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 RNU6-750P-201ENST00000390946 107 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AL590002.1-201ENST00000406554 418 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 MEMO1P3-201ENST00000459811 302 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AL049714.1-201ENST00000466686 347 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 MIR5094-201ENST00000578766 85 ntBASIC-0.37□□□□□ -2.47
COL6A5A8TX70 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.37□□□□□ -2.47
COL6A5A8TX70 MIR548Y-201ENST00000582739 110 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms