Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC008269.2-201ENST00000561915 1105 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC009229.3-201ENST00000608056 282 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC006566.1-201ENST00000608943 513 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC090517.3-201ENST00000625170 141 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RNU6-960P-201ENST00000364056 120 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RNU6-438P-201ENST00000365561 103 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RNU6-72P-201ENST00000384285 79 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RNU6-1222P-201ENST00000384615 107 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 PIGFP2-201ENST00000421400 651 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 MTCO3P5-201ENST00000433620 714 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AP005639.2-201ENST00000527592 928 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC012213.3-201ENST00000577199 777 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 BNIP3P16-201ENST00000589779 534 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AL139286.2-201ENST00000606838 396 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC099842.1-201ENST00000619919 596 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 RNU1-72P-201ENST00000362976 153 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 RNY3P3-201ENST00000363816 102 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 RNU6-371P-201ENST00000364283 108 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 RNU6-116P-201ENST00000384042 109 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 SNORD26-201ENST00000384147 75 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.576-201ENST00000384781 102 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 RNU2-66P-201ENST00000410650 161 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 EEF1A1P40-201ENST00000412883 573 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AL360271.2-201ENST00000447710 161 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 CECR9-201ENST00000453421 199 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 RNU6-333P-201ENST00000459117 107 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 snoU109.2-201ENST00000459316 135 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AC116655.1-201ENST00000508324 901 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 MTCYBP40-201ENST00000509390 1135 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AC104136.1-201ENST00000512969 394 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 MTCO3P28-201ENST00000513351 515 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 LRRC34P2-201ENST00000514850 553 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 SNORA31.18-201ENST00000517043 134 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AP002963.1-201ENST00000530590 184 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 Z84480.1-201ENST00000605131 311 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AC021646.1-201ENST00000605469 484 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 Z99289.3-201ENST00000605586 594 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 SNORD14A-201ENST00000606526 91 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AL627230.6-201ENST00000611129 280 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 AL589743.1-201ENST00000551932 2712 ntBASIC0.79□□□□□ -2.28
COL6A6A6NMZ7 MIR126-201ENST00000362291 85 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 SNORD3E-201ENST00000362899 217 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RNU6-1097P-201ENST00000363586 107 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RNY3P10-201ENST00000384764 102 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RNA5SP450-201ENST00000411206 102 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 MTCO2P34-201ENST00000421994 607 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AL357134.1-201ENST00000445848 426 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RPL31P3-201ENST00000458430 332 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC098862.1-201ENST00000504991 413 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC117522.1-201ENST00000509821 380 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 SNORA25.11-201ENST00000515935 105 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RNU6-415P-201ENST00000516252 97 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RNU6-965P-201ENST00000516721 96 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RN7SKP256-201ENST00000517201 314 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 OR5AL2P-201ENST00000532185 920 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 ZNF519P3-201ENST00000557158 1032 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC092325.1-201ENST00000566449 554 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 MIR4711-201ENST00000578274 70 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 MIR5692A1-201ENST00000580523 69 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC040904.1-201ENST00000590850 223 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 DEFB131E-202ENST00000602581 683 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC025165.5-201ENST00000602802 578 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AL136363.2-201ENST00000604173 851 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC104010.1-201ENST00000616889 150 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC024581.2-201ENST00000619986 252 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC092192.1-201ENST00000633154 1018 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 U4.7-201ENST00000638126 106 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC091812.1-201ENST00000432235 1948 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RNU6-1010P-201ENST00000362757 107 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RNU6-641P-201ENST00000384006 107 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 MIR301A-201ENST00000385261 86 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 SNORA40.3-201ENST00000390964 122 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AL590002.1-201ENST00000406554 418 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms