Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AC008739.2-201ENST00000597006 317 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 HMGB1P24-202ENST00000615653 685 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 MIR6733-201ENST00000635723 61 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 AC002543.1-201ENST00000299783 1954 ntBASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM43BA6NCK2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 RNU6-1040P-201ENST00000383974 107 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 RNU6-784P-201ENST00000384330 106 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 SNORA41-201ENST00000384675 132 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 MIR1302-11-201ENST00000408051 138 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 MIR1302-9-201ENST00000408365 138 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 MIR1302-10-201ENST00000408734 138 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 AC009963.1-201ENST00000417265 157 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 RPL39P40-201ENST00000445481 146 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 RPL31P41-201ENST00000477967 372 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 HSPE1P4-201ENST00000550617 308 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 AC007375.1-201ENST00000554513 578 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 MIR1302-2-201ENST00000607096 138 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 AL359198.2-201ENST00000611836 194 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
TRIM43BA6NCK2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
TRIM43BA6NCK2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM43BA6NCK2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 ZNF299P-201ENST00000406845 1804 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RNU6-212P-201ENST00000362642 104 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 SNORD32A-201ENST00000364805 84 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.394-201ENST00000383942 103 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RNU6-142P-201ENST00000384019 107 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RNU6-1140P-201ENST00000410517 106 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AC011816.1-201ENST00000441346 546 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 MIR2053-201ENST00000459295 91 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RPL36AP48-201ENST00000485521 314 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RPL22P13-201ENST00000493291 347 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RNU6-1153P-201ENST00000516760 105 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 CBX3P8-201ENST00000532412 525 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AC027176.1-201ENST00000560204 514 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AL080274.1-201ENST00000605565 220 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AC009318.2-201ENST00000610917 651 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AL109809.4-201ENST00000603520 2185 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
TRIM43BA6NCK2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 ZNF658B-202ENST00000615961 3375 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 MIR369-201ENST00000362155 70 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.48-201ENST00000362710 103 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 RNU6-1010P-201ENST00000362757 107 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 SNORD50.1-201ENST00000362987 71 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.533-201ENST00000384596 114 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 RNU2-23P-201ENST00000410545 195 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 RNA5SP21-201ENST00000410917 96 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 AL354751.2-201ENST00000415471 210 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 RPL23AP95-201ENST00000426806 265 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.639-201ENST00000458981 102 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 AC112771.1-201ENST00000463581 102 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 AC104564.1-201ENST00000493028 407 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 AC016632.1-201ENST00000503994 196 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 AC022493.2-201ENST00000506122 481 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 SEM1P1-201ENST00000506694 209 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 RNU6-470P-201ENST00000515954 104 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 AC115990.1-201ENST00000526957 301 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 MIR4765-201ENST00000585007 77 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 7SK.7-201ENST00000603504 247 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 MTND5P30-201ENST00000452896 1731 ntBASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43BA6NCK2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.197-201ENST00000364004 102 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 RNU6-968P-201ENST00000384076 107 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 AC005534.2-201ENST00000431047 433 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 Z98742.2-201ENST00000431564 187 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 AL353997.1-201ENST00000432936 108 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms