Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TCRBV7S3A2A0A539 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AC010329.5-201ENST00000623497 2174 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.577-201ENST00000384794 101 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 RNA5SP21-201ENST00000410917 96 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AC138623.1-201ENST00000418060 216 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AC097463.2-201ENST00000421074 142 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AIMP1P2-201ENST00000425294 312 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AC087499.2-201ENST00000432861 149 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 RN7SKP210-201ENST00000459176 261 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 RPL22P13-201ENST00000493291 347 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-120P-201ENST00000516077 103 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AC007536.1-201ENST00000533382 349 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 MRPS36P4-201ENST00000534436 298 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 SNORA50A-202ENST00000629536 136 ntBASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.69□□□□□ -1.98
TCRBV7S3A2A0A539 AC233981.2-201ENST00000611524 1614 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.40-201ENST00000362645 93 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RNU5B-2P-201ENST00000363036 113 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 SNORD46.1-201ENST00000364139 104 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RNU4-9P-201ENST00000364951 139 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-968P-201ENST00000384076 107 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.445-201ENST00000384168 102 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 SNORA29-201ENST00000384183 140 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 SNORA48.8-201ENST00000391324 134 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 MTCYBP2-201ENST00000407745 171 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AL358453.1-201ENST00000422522 250 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 Z98742.2-201ENST00000431564 187 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AC112771.1-201ENST00000463581 102 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RPL30P1-201ENST00000488676 339 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RPL23AP75-201ENST00000491601 451 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 MTND4LP22-201ENST00000508209 276 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.711-201ENST00000516993 102 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-699P-201ENST00000517081 110 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AL590705.4-201ENST00000532209 134 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AC021231.3-201ENST00000558497 370 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AC104581.2-201ENST00000572227 430 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 MIR3944-201ENST00000581277 108 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 MIR3171-201ENST00000584270 74 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 MIR4765-201ENST00000585007 77 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RPL23AP78-201ENST00000599928 470 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 SCARNA4-201ENST00000629045 128 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 AL079305.1-201ENST00000623159 3008 ntBASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.68□□□□□ -1.98
TCRBV7S3A2A0A539 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC073346.2-201ENST00000624724 2058 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 SNORA25.6-201ENST00000364121 118 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.504-201ENST00000384481 104 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 RNU1-57P-201ENST00000384491 166 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 MIR186-201ENST00000384988 86 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 PMCHL1-202ENST00000423102 261 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 GPM6BP3-201ENST00000442797 145 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AL035666.1-201ENST00000446195 348 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC090096.1-201ENST00000489168 390 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AIG1P1-201ENST00000503376 148 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 RNA5SP112-201ENST00000515937 99 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC007375.1-201ENST00000554513 578 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 MIR3136-201ENST00000583498 78 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC010620.2-201ENST00000600135 313 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC073410.2-201ENST00000603240 332 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC007742.2-201ENST00000618226 398 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 AC099654.10-201ENST00000640395 161 ntBASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
TCRBV7S3A2A0A539 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 Z75746.1-201ENST00000440243 2080 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 SNORD115-32-201ENST00000364079 82 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 Y_RNA.326-201ENST00000365176 113 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 RNU6-1328P-201ENST00000410938 106 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 MTCYBP10-201ENST00000424905 650 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AL353997.1-201ENST00000432936 108 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AC099799.1-201ENST00000439809 192 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms