Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 SNORA72.2-201ENST00000365028 127 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-142P-201ENST00000384019 107 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 SNORA50A-201ENST00000384225 134 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 Y_RNA.578-201ENST00000390903 88 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 AL035398.1-201ENST00000430869 322 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 MTCYBP39-201ENST00000437562 491 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU7-14P-201ENST00000459331 62 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 AC005840.1-201ENST00000498412 377 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 HMGN1P12-201ENST00000499125 195 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 RNA5SP102-201ENST00000516865 106 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 AP001893.2-201ENST00000526949 202 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 MIR548AC-201ENST00000585049 88 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 Z83818.1-201ENST00000603584 150 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 AL353149.1-201ENST00000610667 244 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 AC026585.1-201ENST00000619582 524 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 AC131159.1-201ENST00000621854 213 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 RMST_7.1-201ENST00000621935 268 ntBASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU5E-6P-201ENST00000365574 115 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AL031577.2-201ENST00000404133 280 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 Y_RNA.595-201ENST00000410403 105 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 UBE2D3P3-201ENST00000426992 425 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC092423.1-201ENST00000430165 186 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 GAPDHP17-201ENST00000449858 1001 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC091435.1-201ENST00000505442 584 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-922P-201ENST00000516753 99 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-856P-201ENST00000516959 98 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC021231.3-201ENST00000558497 370 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 MIR4742-201ENST00000581069 85 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 KC877982.1-201ENST00000602313 470 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC012507.3-201ENST00000603556 477 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AL513534.2-201ENST00000603836 250 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 AC021506.2-201ENST00000612354 169 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-1179P-201ENST00000384667 107 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 MTCYBP2-201ENST00000407745 171 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 RPL23AP30-201ENST00000432419 501 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 RSL24D1P8-201ENST00000434442 492 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 AC104806.1-201ENST00000508720 308 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 AC011406.1-201ENST00000512440 370 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU5F-4P-201ENST00000516581 114 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-1098P-201ENST00000516772 96 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 MIR4498-201ENST00000577599 66 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 MIR5695-201ENST00000579717 85 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 MIR4714-201ENST00000580728 77 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 AL512605.2-201ENST00000592972 256 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 AC012557.2-201ENST00000605919 418 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 AC245297.2-201ENST00000610119 565 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.23□□□□□ -2.37
TRBV27A0A0K0K1C4 RNY1P10-201ENST00000363268 113 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-527P-201ENST00000363425 104 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 U3.8-201ENST00000363675 217 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-621P-201ENST00000364752 109 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-877P-201ENST00000383868 107 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-1026P-201ENST00000384465 108 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU2-62P-201ENST00000410868 191 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-321P-201ENST00000410912 106 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 AC073614.1-201ENST00000438690 650 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 SNRPFP3-201ENST00000457792 225 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 AL162395.1-201ENST00000457882 422 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RPS26P48-201ENST00000491713 339 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 AC113410.1-201ENST00000505029 247 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RNA5SP216-201ENST00000516111 123 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 AC090888.2-201ENST00000559765 1144 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 CTHRC1P1-201ENST00000605383 469 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 AL354696.1-201ENST00000614652 497 ntBASIC0.22□□□□□ -2.37
TRBV27A0A0K0K1C4 RNU6-511P-201ENST00000363496 107 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 RNU6-960P-201ENST00000364056 120 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 Y_RNA.311-201ENST00000365068 96 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 RNY3P13-201ENST00000365542 102 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 SNORA40.2-201ENST00000390847 128 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AC060773.1-201ENST00000421698 310 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 FABP5P4-201ENST00000437203 171 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 RPEP5-201ENST00000441137 268 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AC002350.1-201ENST00000490759 375 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 AC027338.1-201ENST00000514840 825 ntBASIC0.21□□□□□ -2.38
TRBV27A0A0K0K1C4 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms