Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 AC025423.5-201ENST00000550230 219 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 AC146944.4-201ENST00000602697 718 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 SNORD14A-201ENST00000606526 91 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 Z82243.1-201ENST00000609432 473 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 U2.17-201ENST00000611454 95 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 FAM157A-202ENST00000615155 405 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 uc_338.11-201ENST00000619132 160 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 AL159153.1-201ENST00000619688 317 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 MIR3529-201ENST00000637713 78 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 OR4G1P-203ENST00000641984 1631 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 AL359851.1-201ENST00000569460 4997 ntBASIC1.46□□□□□ -2.18
TRAV40A0A0B4J280 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 SNORD114-19-201ENST00000363072 75 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-944P-201ENST00000364023 107 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 SNORA3A-201ENST00000364113 130 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNU4-12P-201ENST00000365233 139 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 SNORA36A-201ENST00000384221 132 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-1274P-201ENST00000384557 107 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNA5SP213-201ENST00000391031 106 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-332P-201ENST00000391193 108 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 MIR1294-201ENST00000408503 142 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RPL39P29-201ENST00000447779 157 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC013470.1-201ENST00000453438 462 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-1208P-201ENST00000459588 107 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AL121594.1-201ENST00000475906 575 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AF213884.2-201ENST00000510417 903 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC011352.1-201ENST00000512300 793 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-377P-201ENST00000515965 102 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-189P-201ENST00000516120 101 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-1069P-201ENST00000516612 133 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC007375.1-201ENST00000554513 578 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC068790.6-201ENST00000602558 258 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC073410.2-201ENST00000603240 332 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 ELOCP5-201ENST00000604924 333 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 uc_338.15-201ENST00000615470 191 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC063943.3-201ENST00000615562 356 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC103705.1-201ENST00000619013 241 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 MIR7157-201ENST00000635801 60 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 MIR1321-201ENST00000637766 79 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 AC068137.3-201ENST00000639191 341 ntBASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
TRAV40A0A0B4J280 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 MTND5P30-201ENST00000452896 1731 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-1010P-201ENST00000362757 107 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RNY3P3-201ENST00000363816 102 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.231-201ENST00000364358 102 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.373-201ENST00000365600 103 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 Y_RNA.450-201ENST00000384198 113 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RNU1-57P-201ENST00000384491 166 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RNU2-23P-201ENST00000410545 195 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AL030996.1-201ENST00000411430 235 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 MTND1P4-201ENST00000435196 415 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AL603825.1-201ENST00000438481 80 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC080013.2-201ENST00000460866 323 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RPS27P21-201ENST00000486977 252 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC018437.1-201ENST00000492214 406 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC069439.1-201ENST00000494739 167 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC092436.3-201ENST00000511788 257 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC107393.1-201ENST00000512403 346 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 MIR514B-201ENST00000516774 80 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-250P-201ENST00000516958 103 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 SNORA31.18-201ENST00000517043 134 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-323P-201ENST00000521915 107 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC233702.2-202ENST00000562547 291 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AL357078.3-201ENST00000607528 618 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-91P-201ENST00000607774 107 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC090517.2-201ENST00000614966 680 ntBASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 FER-210ENST00000628534 558 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV40A0A0B4J280 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 SNORD32A-201ENST00000364805 84 ntBASIC1.43□□□□□ -2.18
TRAV40A0A0B4J280 RNU6-487P-201ENST00000365430 104 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms