Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MTND5P33-201ENST00000571250 1450 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU1-133P-201ENST00000364867 167 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-438P-201ENST00000365561 103 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-342P-201ENST00000384521 104 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORA16.2-201ENST00000390991 127 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC244098.3-201ENST00000424803 96 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC007969.2-201ENST00000441891 191 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 ART2BP-201ENST00000453501 499 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-953P-201ENST00000459154 107 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC010531.2-201ENST00000465012 153 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AL049830.1-201ENST00000468034 425 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-237P-201ENST00000515985 71 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORA43.2-201ENST00000516652 128 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 AC112204.3-201ENST00000623822 332 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR924-201ENST00000638017 53 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.01□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-395P-201ENST00000365662 106 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6-505P-201ENST00000384427 107 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR653-201ENST00000385279 96 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORD41-201ENST00000386967 70 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORA75.2-201ENST00000391138 150 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORA75.3-201ENST00000391231 150 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU6ATAC15P-201ENST00000408279 121 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 C1DP2-201ENST00000418167 426 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AL627311.1-201ENST00000431514 115 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC073614.1-201ENST00000438690 650 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 NFU1P2-201ENST00000448700 469 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 RPL7P55-201ENST00000450522 746 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC079776.3-201ENST00000450665 370 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 C1DP4-201ENST00000455429 424 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC016925.1-201ENST00000458303 298 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 HMGN1P12-201ENST00000499125 195 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AP003327.1-201ENST00000529684 127 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORD56.1-201ENST00000362913 68 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORD31B-201ENST00000364977 69 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 RNU4-45P-201ENST00000365469 141 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORD116-13-201ENST00000384408 92 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR1305-201ENST00000408300 86 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AC060773.1-201ENST00000421698 310 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AP003355.1-201ENST00000518956 587 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AC007834.2-201ENST00000536310 343 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AL929325.1-201ENST00000603096 117 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AC091805.2-201ENST00000603848 235 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AL162730.1-201ENST00000605734 292 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AC022893.3-201ENST00000607665 437 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 MIR338-201ENST00000636369 67 ntBASIC-0.03□□□□□ -2.41
TRAV1-2A0A0B4J238 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-792P-201ENST00000363490 107 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 SNORD114-23-201ENST00000363536 72 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 RPL21P1-201ENST00000399532 476 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 CALM2P3-201ENST00000400429 449 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 MRPS36P1-201ENST00000421291 307 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 DEFB130D-201ENST00000426866 237 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 MTND5P2-201ENST00000442927 1142 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 AC007395.1-201ENST00000451333 677 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-405P-201ENST00000516637 110 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-856P-201ENST00000516959 98 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-467P-201ENST00000517027 110 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 AC106038.2-201ENST00000520706 568 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 AL138889.2-201ENST00000603883 242 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 Z98751.3-201ENST00000604447 521 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 AL022154.1-201ENST00000604698 785 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms