Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 SUB1P4-201ENST00000566062 339 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR3169-201ENST00000578032 83 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC005786.1-201ENST00000588553 154 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 BNIP3P16-201ENST00000589779 534 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC006566.1-201ENST00000608943 513 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC008250.2-201ENST00000615261 205 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AF246928.1-201ENST00000623768 87 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC006026.1-201ENST00000444025 1803 ntBASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-105P-201ENST00000363909 104 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-74P-201ENST00000384235 107 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR544A-201ENST00000384855 91 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-550P-201ENST00000391057 101 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL357139.1-201ENST00000407792 426 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR1267-201ENST00000408723 78 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 CYCSP33-201ENST00000414485 327 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNA5SP269-201ENST00000459032 137 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC087477.1-201ENST00000465747 340 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 SNORA25.15-201ENST00000516487 89 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AP001893.2-201ENST00000526949 202 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR4775-201ENST00000581168 75 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC008945.2-201ENST00000606056 604 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC011155.2-201ENST00000623202 216 ntBASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COMMD3-BMI1R4GMX3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNY4P34-201ENST00000364779 95 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-142P-201ENST00000384019 107 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-116P-201ENST00000384042 109 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AMD1P1-201ENST00000457220 922 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 HMGN1P13-201ENST00000505795 138 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-377P-201ENST00000515965 102 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL356057.1-201ENST00000533798 831 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC023050.3-201ENST00000541142 333 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC008752.3-201ENST00000588113 712 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL590229.1-201ENST00000603497 542 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL590240.4-201ENST00000616908 390 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL603755.1-201ENST00000619504 163 ntBASIC1.36□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC091812.1-201ENST00000432235 1948 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-271P-201ENST00000363858 105 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU4-56P-201ENST00000364700 142 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU4-48P-201ENST00000365559 182 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 SNORA40.3-201ENST00000390964 122 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR1323-201ENST00000408090 73 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 CYCSP46-201ENST00000423569 204 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC000111.3-201ENST00000433478 193 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL121601.2-201ENST00000438019 707 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC079448.1-201ENST00000449377 373 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 GAPDHP17-201ENST00000449858 1001 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC013470.1-201ENST00000453438 462 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU7-125P-201ENST00000458760 62 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU1-131P-201ENST00000458943 161 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU5F-2P-201ENST00000516066 82 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNA5SP458-201ENST00000516188 119 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RN7SKP219-201ENST00000516825 296 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNA5SP503-201ENST00000517047 117 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-1220P-201ENST00000517126 108 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC087441.2-201ENST00000529141 262 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 MIR3683-201ENST00000580847 82 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 RPL17P51-201ENST00000605218 238 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC097372.5-201ENST00000623665 376 ntBASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.35□□□□□ -2.19
COMMD3-BMI1R4GMX3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 FGF7P2-201ENST00000332473 296 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms