Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC245297.2-201ENST00000610119 565 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 AL356596.1-201ENST00000624230 379 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 AC013262.1-201ENST00000426710 252 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AL669831.1-202ENST00000428504 417 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 LARP1BP3-201ENST00000437229 869 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 MTCO3P28-201ENST00000513351 515 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-914P-201ENST00000516749 109 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-677P-201ENST00000516914 101 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AC087894.1-201ENST00000538359 518 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AC112220.3-201ENST00000605502 502 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 MIR8063-201ENST00000621930 81 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 OR4G2P-201ENST00000328113 903 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 MTND3P13-201ENST00000574391 343 ntBASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
SCN10AQ9Y5Y9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-462P-201ENST00000362659 105 ntBASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 Y_RNA.85-201ENST00000363014 111 ntBASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-743P-201ENST00000364151 106 ntBASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-1054P-201ENST00000411293 104 ntBASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 BTBD7P2-201ENST00000441962 620 ntBASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 HAR1A.1-201ENST00000459583 118 ntBASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 AC109445.1-201ENST00000512356 383 ntBASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-296P-201ENST00000384608 107 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 SNORA40.2-201ENST00000390847 128 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 RPL23AP32-201ENST00000395315 459 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 FCF1P10-201ENST00000407590 479 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 OR2AQ1P-201ENST00000451972 200 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 RNA5SP337-201ENST00000517007 109 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC004812.1-201ENST00000540773 146 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC019288.1-201ENST00000557918 224 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC008751.2-201ENST00000597885 980 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AL391001.1-201ENST00000602747 715 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 7SK.7-201ENST00000603504 247 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 Y_RNA.274-201ENST00000364714 101 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 SNORA72.2-201ENST00000365028 127 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 SNORA22-201ENST00000383907 134 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-439P-201ENST00000384188 106 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-16P-201ENST00000384385 107 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 SNORA22C-201ENST00000384614 134 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 RNA5SP511-201ENST00000410487 115 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC006366.1-201ENST00000422002 759 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 SCARNA16.2-201ENST00000516520 172 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 RN7SKP88-201ENST00000516847 250 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-1092P-201ENST00000516955 87 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AP003484.1-201ENST00000530974 250 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC025678.1-201ENST00000567861 338 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AL022345.2-201ENST00000606307 135 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 7SK.8-201ENST00000612110 250 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 7SK.11-201ENST00000615477 250 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 7SK.13-201ENST00000622040 250 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC068205.3-201ENST00000636385 468 ntBASIC0.68□□□□□ -2.3
SCN10AQ9Y5Y9 AC245060.5-201ENST00000610778 3293 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 ELOCP17-201ENST00000414751 326 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 ELOCP9-201ENST00000418624 239 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 PIGFP2-201ENST00000421400 651 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 USP9YP11-201ENST00000427537 717 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC245047.4-201ENST00000433189 144 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC007327.1-201ENST00000447461 264 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 snoU109.2-201ENST00000459316 135 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC067942.3-201ENST00000512025 362 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 RNA5SP437-201ENST00000517249 129 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC010376.1-201ENST00000522101 334 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC109446.1-201ENST00000566172 220 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 AC007363.1-201ENST00000604736 620 ntBASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.67□□□□□ -2.3
SCN10AQ9Y5Y9 SNORA63D-201ENST00000364359 132 ntBASIC0.66□□□□□ -2.3
SCN10AQ9Y5Y9 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 376.2 ms