Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 AC009779.6-201ENST00000603972 165 ntBASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 AL450472.1-202ENST00000637286 180 ntBASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB4Q9Y5E5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AL356274.2-201ENST00000624379 3752 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 RNU5B-2P-201ENST00000363036 113 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 RNU6-879P-201ENST00000364328 108 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 RNU6-1280P-201ENST00000365211 107 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 RNU6-926P-201ENST00000384075 107 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 RNU6-102P-201ENST00000384485 104 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 RNA5SP213-201ENST00000391031 106 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AC016700.2-201ENST00000446011 156 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 HMGN2P10-201ENST00000448085 265 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 CYCSP35-201ENST00000451978 304 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 SUMO1P2-201ENST00000452524 304 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 SNRPGP7-201ENST00000469016 106 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 RN7SL293P-201ENST00000481765 281 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 RNU6-1114P-201ENST00000516022 107 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 SNORA31.23-201ENST00000517219 133 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 MIR1254-2-201ENST00000579553 63 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AC024220.1-201ENST00000603675 484 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AL162713.1-201ENST00000604480 262 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AL356157.2-201ENST00000605122 111 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 AC073657.2-201ENST00000605661 303 ntBASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHB4Q9Y5E5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHB4Q9Y5E5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHB4Q9Y5E5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AL672296.1-201ENST00000427780 2158 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 RNA5SP361-201ENST00000362686 118 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.54-201ENST00000362766 105 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.117-201ENST00000363294 101 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 SNORD113-8-201ENST00000363497 74 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AP002088.1-201ENST00000382740 395 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 RNU6-142P-201ENST00000384019 107 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 U8.10-201ENST00000384260 133 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.504-201ENST00000384481 104 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 MIR544A-201ENST00000384855 91 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 MIR23A-201ENST00000385245 73 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 RNU2-14P-201ENST00000411053 191 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 HMGN2P16-201ENST00000456802 261 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 RNA5SP310-201ENST00000459084 116 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 RPL21P10-201ENST00000463521 490 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 MED28P2-201ENST00000475771 317 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 RPS4XP13-201ENST00000483219 789 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AC093663.1-201ENST00000497190 394 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AC006445.2-201ENST00000510061 472 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 RNU5B-3P-201ENST00000516601 115 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AC016256.1-201ENST00000547971 354 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 HSPE1P4-201ENST00000550617 308 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AC027288.2-201ENST00000553028 243 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AL391261.3-201ENST00000557194 520 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 AC073308.1-201ENST00000623696 305 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 MIR7153-201ENST00000637758 57 ntBASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB4Q9Y5E5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 RNU6-1266P-201ENST00000362794 105 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 MIR449B-201ENST00000384995 97 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 RPS4XP3-201ENST00000398541 413 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 BPY2DP-201ENST00000422208 265 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 AC096638.1-201ENST00000444678 216 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 AC091153.1-201ENST00000466297 402 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 GZMAP1-201ENST00000503054 631 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 RNU6-496P-201ENST00000516145 99 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 NACAP3-201ENST00000552100 481 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 AC009163.5-201ENST00000575421 637 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 AC130289.1-201ENST00000577321 73 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 MIR5571-201ENST00000577998 113 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 MIR4276-201ENST00000584832 70 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 AL365434.2-201ENST00000607979 234 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 AC058791.1-201ENST00000608412 3198 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 AC098479.1-201ENST00000609225 154 ntBASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 RMST_8.1-201ENST00000610287 165 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms