Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 AMZ2P1-203ENST00000565833 850 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 RPS29P30-201ENST00000600975 111 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 MIR622-201ENST00000638396 96 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 MIR30E-201ENST00000362104 92 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.276-201ENST00000364732 109 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.288-201ENST00000364854 92 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.489-201ENST00000384410 101 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 MIR325-201ENST00000385260 98 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 AC010099.1-201ENST00000455434 375 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 AC125232.2-201ENST00000592457 143 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 AC078899.3-201ENST00000599065 212 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 AC093732.2-201ENST00000607950 274 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 AC009318.2-201ENST00000610917 651 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.61□□□□□ -1.83
CTDP1Q9Y5B0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 U3.6-201ENST00000363622 211 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.461-201ENST00000384263 103 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-784P-201ENST00000384330 106 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 MT-TR-201ENST00000387439 65 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 SNORA59A-201ENST00000459326 152 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 SNORA25.11-201ENST00000515935 105 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 SNORA40.15-201ENST00000516884 107 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-388P-201ENST00000517012 105 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-389P-201ENST00000517048 105 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 SNORA31.26-201ENST00000517250 137 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 EIF4BP1-201ENST00000554881 351 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 MIR4782-201ENST00000577987 79 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 AL390123.1-201ENST00000603216 237 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 RAC1P9-201ENST00000604990 392 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 AL137843.1-201ENST00000605078 385 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 AL442067.1-201ENST00000613261 223 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 AC022336.2-201ENST00000568966 2538 ntBASIC3.6□□□□□ -1.83
CTDP1Q9Y5B0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 MIR22-201ENST00000362190 85 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-227P-201ENST00000362865 103 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 SNORD50.1-201ENST00000362987 71 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.214-201ENST00000364201 112 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-140P-201ENST00000384566 108 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 MIR1302-6-201ENST00000408466 90 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 RNA5SP494-201ENST00000410653 129 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 ELOCP20-201ENST00000422460 345 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 AC104332.2-201ENST00000429959 156 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 RPL30P10-201ENST00000488148 337 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-397P-201ENST00000516226 104 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-911P-201ENST00000516523 104 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 AC010186.2-204ENST00000537668 439 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 AC005046.1-201ENST00000608515 625 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 MIR7106-201ENST00000612419 65 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 AL159153.1-201ENST00000619688 317 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 U4.7-201ENST00000638126 106 ntBASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CTDP1Q9Y5B0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CTDP1Q9Y5B0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.222-201ENST00000364264 102 ntBASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 RNU6-72P-201ENST00000384285 79 ntBASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 SNORD67-201ENST00000390833 111 ntBASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.592-201ENST00000410274 109 ntBASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 AC009969.1-201ENST00000438726 172 ntBASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 Z98949.2-201ENST00000440996 144 ntBASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 HMGN1P18-201ENST00000457642 277 ntBASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.58□□□□□ -1.84
CTDP1Q9Y5B0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms