Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 HMGN2P9-201ENST00000476875 229 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 AC079140.3-201ENST00000511111 550 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 AC116347.2-201ENST00000514912 523 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 RNA5SP481-201ENST00000516814 122 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 MIR5692A1-201ENST00000580523 69 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 MIR3136-201ENST00000583498 78 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 AL139418.1-201ENST00000613613 177 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 SNORD98-201ENST00000636377 67 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-105P-201ENST00000363909 104 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-809P-201ENST00000384461 107 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-636P-201ENST00000384598 107 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 MIR194-1-201ENST00000384892 85 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 RNU2-3P-201ENST00000410144 191 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 RPS27AP14-201ENST00000422868 454 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 EXOSC3P1-201ENST00000448649 500 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 RPS23P4-201ENST00000487908 423 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 RBBP4P6-201ENST00000508098 202 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 RNU5A-4P-201ENST00000516588 111 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 RNA5SP404-201ENST00000517118 132 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 AC097372.5-201ENST00000623665 376 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 Z69720.2-201ENST00000624755 279 ntBASIC0.87□□□□□ -2.27
HDGFL3Q9Y3E1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-1019P-201ENST00000364424 107 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-1080P-201ENST00000383982 107 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 SNORA32.2-201ENST00000384049 122 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-1065P-201ENST00000384513 106 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-1176P-201ENST00000390955 107 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 SNORA12.2-201ENST00000391040 156 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 RNU2-7P-201ENST00000410794 178 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-607P-201ENST00000411283 108 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 AC243964.1-201ENST00000441814 261 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 Z73417.1-201ENST00000447373 778 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 MTND3P25-201ENST00000509243 135 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 AC087883.1-201ENST00000551882 391 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 AC073539.2-201ENST00000597113 165 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 AC009033.1-201ENST00000624279 431 ntBASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.86□□□□□ -2.27
HDGFL3Q9Y3E1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-61P-201ENST00000365528 109 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 MIR558-201ENST00000384920 94 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 MTCYBP36-201ENST00000404146 440 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 RNU2-39P-201ENST00000410604 198 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 CYCSP33-201ENST00000414485 327 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 MTCO1P21-201ENST00000416634 589 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 MED13P1-201ENST00000428342 171 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 RPS27P1-201ENST00000450552 247 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 ATP5J2P3-201ENST00000451550 258 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 snoU13.30-201ENST00000458951 104 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC112204.1-201ENST00000502591 103 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC117522.1-201ENST00000509821 380 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 MTCO3P28-201ENST00000513351 515 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 SNORD116-28-201ENST00000516123 91 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-685P-201ENST00000517088 95 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 CENPUP1-201ENST00000526649 1202 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AL512310.8-201ENST00000550183 120 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC110760.3-201ENST00000598794 467 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AL590229.1-201ENST00000603497 542 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-87P-201ENST00000607561 108 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC018645.2-201ENST00000609151 472 ntBASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.85□□□□□ -2.27
HDGFL3Q9Y3E1 AC245060.5-201ENST00000610778 3293 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-862P-201ENST00000362804 105 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 RNU1-124P-201ENST00000363861 145 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-438P-201ENST00000365561 103 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 RNA5SP201-201ENST00000410316 124 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 RNA5SP111-201ENST00000411386 101 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 ARL5AP1-201ENST00000418991 388 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AC000111.3-201ENST00000433478 193 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AC084290.1-201ENST00000434995 374 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 RPS24P1-201ENST00000438550 371 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 snoU109.3-201ENST00000459477 145 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AC010587.1-201ENST00000505809 469 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 RNU7-40P-201ENST00000516397 64 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 SNORA31.16-201ENST00000516773 139 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms